A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1506.5
nTPM
Monaco:
837.7
nTPM
Schmiedel:
858.8
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1506.5
HPA sample
nTPM
Classical monocyte nTPM: 1465.4
Samples: 6
Max nTPM: 2428.4
Min nTPM: 1101.2
P10809_1003
2428.4
P10809_1020
1101.2
P10809_1039
1327.5
P10809_1058
1135.7
P10809_1080
1195.6
P10809_1107
1603.9
Intermediate monocyte nTPM: 1506.5
Samples: 6
Max nTPM: 2222.9
Min nTPM: 1052.6
P10809_1004
1184.3
P10809_1023
1719.0
P10809_1042
1683.9
P10809_1061
1052.6
P10809_1081
1176.5
P10809_1108
2222.9
Non-classical monocyte nTPM: 1484.9
Samples: 5
Max nTPM: 2115.6
Min nTPM: 1184.9
P10809_1005
1481.5
P10809_1053
1439.6
P10809_1072
1203.1
P10809_1082
1184.9
P10809_1109
2115.6
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
837.7
Monaco sample
nTPM
Classical monocyte nTPM: 576.7
Samples: 4
Max nTPM: 685.9
Min nTPM: 391.6
RHH5313_R3680
561.1
RHH5221_R3593
391.6
RHH5250_R3622
668.3
RHH5279_R3651
685.9
Intermediate monocyte nTPM: 837.7
Samples: 4
Max nTPM: 1131.6
Min nTPM: 649.5
RHH5314_R3681
1131.6
RHH5222_R3594
649.5
RHH5251_R3623
711.3
RHH5280_R3652
858.4
Non-classical monocyte nTPM: 696.4
Samples: 4
Max nTPM: 832.3
Min nTPM: 532.8
RHH5315_R3682
832.3
RHH5223_R3595
532.8
RHH5252_R3624
614.1
RHH5281_R3653
806.5
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
858.8
Schmiedel sample id
TPM
Classical monocyte TPM: 781.6
Samples: 91
Max TPM: 1313.0
Min TPM: 364.8
MONOCYTES_1
1313.0
MONOCYTES_2
1216.2
MONOCYTES_3
1175.2
MONOCYTES_4
1131.5
MONOCYTES_5
1131.0
MONOCYTES_6
1123.8
MONOCYTES_7
1120.8
MONOCYTES_8
1113.4
MONOCYTES_9
1098.4
MONOCYTES_10
1049.0
MONOCYTES_11
992.9
MONOCYTES_12
991.6
MONOCYTES_13
967.7
MONOCYTES_14
966.5
MONOCYTES_15
966.3
MONOCYTES_16
963.9
MONOCYTES_17
956.7
MONOCYTES_18
956.7
MONOCYTES_19
936.2
MONOCYTES_20
928.2
MONOCYTES_21
924.4
MONOCYTES_22
922.4
MONOCYTES_23
918.9
MONOCYTES_24
913.8
MONOCYTES_25
908.8
MONOCYTES_26
905.6
MONOCYTES_27
905.1
MONOCYTES_28
897.3
MONOCYTES_29
894.2
MONOCYTES_30
884.2
MONOCYTES_31
877.5
MONOCYTES_32
871.3
MONOCYTES_33
870.2
MONOCYTES_34
859.4
MONOCYTES_35
858.9
MONOCYTES_36
853.7
MONOCYTES_37
851.8
MONOCYTES_38
840.3
MONOCYTES_39
834.2
MONOCYTES_40
816.0
MONOCYTES_41
814.7
MONOCYTES_42
814.0
MONOCYTES_43
811.8
MONOCYTES_44
811.5
MONOCYTES_45
800.6
MONOCYTES_46
798.0
MONOCYTES_47
788.2
MONOCYTES_48
782.0
MONOCYTES_49
773.5
MONOCYTES_50
765.8
MONOCYTES_51
753.3
MONOCYTES_52
748.3
MONOCYTES_53
735.3
MONOCYTES_54
732.4
MONOCYTES_55
729.7
MONOCYTES_56
719.9
MONOCYTES_57
703.1
MONOCYTES_58
701.2
MONOCYTES_59
697.9
MONOCYTES_60
685.0
MONOCYTES_61
682.4
MONOCYTES_62
681.8
MONOCYTES_63
680.2
MONOCYTES_64
677.9
MONOCYTES_65
675.0
MONOCYTES_66
663.3
MONOCYTES_67
660.8
MONOCYTES_68
654.5
MONOCYTES_69
650.3
MONOCYTES_70
625.6
MONOCYTES_71
623.1
MONOCYTES_72
614.3
MONOCYTES_73
613.0
MONOCYTES_74
607.0
MONOCYTES_75
595.8
MONOCYTES_76
563.9
MONOCYTES_77
561.5
MONOCYTES_78
549.6
MONOCYTES_79
528.2
MONOCYTES_80
514.1
MONOCYTES_81
507.5
MONOCYTES_82
498.1
MONOCYTES_83
483.9
MONOCYTES_84
471.2
MONOCYTES_85
444.8
MONOCYTES_86
432.1
MONOCYTES_87
425.6
MONOCYTES_88
423.5
MONOCYTES_89
395.9
MONOCYTES_90
381.6
MONOCYTES_91
364.8
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Non-classical monocyte TPM: 858.8
Samples: 90
Max TPM: 1466.1
Min TPM: 191.8
M2_1
1466.1
M2_2
1408.0
M2_3
1378.8
M2_4
1307.4
M2_5
1302.1
M2_6
1300.8
M2_7
1291.8
M2_8
1289.8
M2_9
1283.4
M2_10
1276.3
M2_11
1260.6
M2_12
1251.8
M2_13
1249.3
M2_14
1234.0
M2_15
1178.7
M2_16
1173.9
M2_17
1172.4
M2_18
1155.9
M2_19
1119.1
M2_20
1100.2
M2_21
1083.6
M2_22
1075.0
M2_23
1070.2
M2_24
1057.4
M2_25
1050.4
M2_26
1046.4
M2_27
1034.2
M2_28
1030.4
M2_29
1027.5
M2_30
1016.2
M2_31
1000.2
M2_32
992.0
M2_33
985.3
M2_34
982.2
M2_35
968.8
M2_36
962.4
M2_37
951.8
M2_38
949.7
M2_39
936.9
M2_40
934.1
M2_41
933.4
M2_42
926.0
M2_43
915.6
M2_44
899.7
M2_45
896.6
M2_46
889.3
M2_47
874.8
M2_48
856.4
M2_49
855.9
M2_50
849.6
M2_51
825.3
M2_52
823.1
M2_53
819.9
M2_54
814.8
M2_55
812.5
M2_56
801.5
M2_57
797.8
M2_58
795.6
M2_59
737.1
M2_60
733.5
M2_61
722.0
M2_62
703.8
M2_63
696.3
M2_64
690.5
M2_65
669.7
M2_66
668.9
M2_67
637.0
M2_68
623.7
M2_69
610.5
M2_70
607.4
M2_71
601.1
M2_72
588.2
M2_73
579.6
M2_74
552.6
M2_75
529.8
M2_76
525.9
M2_77
472.1
M2_78
463.5
M2_79
438.5
M2_80
423.6
M2_81
396.2
M2_82
390.9
M2_83
385.0
M2_84
377.5
M2_85
376.8
M2_86
349.6
M2_87
310.1
M2_88
254.5
M2_89
242.4
M2_90
191.8
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