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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
850.2
nTPM
HPA Brain:
319.0
nTPM
GTEx:
850.2
nTPM
FANTOM5:
83.8
Scaled Tags Per Million
Mouse:
248.7
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
319.0
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 286.9
2586
Male, age 75, left hemisphere
325.8
2666
Male, age 74, left hemisphere
305.2
2828
Female, age 72, unknown
295.2
2411
Female, age 72, unknown
290.6
2019
Male, age 18, unknown
290.3
1870
Female, age 42, unknown
281.6
1830
Male, age 51, unknown
279.8
1833
Male, age 53, unknown
276.5
1827
Male, age 72, unknown
274.1
2219
Male, age 76, both hemispheres
249.8
Dorsal raphe nucleus nTPM: 276.1
2750
Male, age 76, both hemispheres
296.5
2298
Female, age 72, unknown
295.8
2016
Female, age 72, unknown
281.2
1828
Male, age 53, unknown
254.5
2047
Male, age 72, unknown
252.5
Inferior colliculus nTPM: 263.0
2097
Female, age 72, unknown
272.0
1890
Male, age 53, unknown
270.7
2849
Male, age 72, unknown
258.4
1848
Female, age 42, unknown
250.8
Median raphe nucleus nTPM: 300.1
2220
Male, age 76, midline
300.1
Periaquaductal grey, anterior nTPM: 305.0
2502
Female, age 75, unknown
359.4
1795
Male, age 51, unknown
295.2
1947
Male, age 18, unknown
260.3
Periaquaductal grey, dorsal nTPM: 261.4
2850
Male, age 76, both hemispheres
266.5
1840
Male, age 53, unknown
265.6
1831
Male, age 72, unknown
263.0
2464
Female, age 72, unknown
250.5
Periaquaductal grey, lateral nTPM: 259.6
2272
Male, age 74, both hemispheres
261.7
2053
Male, age 18, unknown
260.5
2140
Male, age 76, both hemispheres
256.7
Pretectal area nTPM: 272.8
1815
Male, age 53, unknown
300.2
1817
Female, age 42, unknown
287.6
1816
Male, age 51, unknown
283.2
2407
Male, age 75, both hemispheres
276.7
2007
Male, age 72, unknown
275.2
2273
Male, age 74, both hemispheres
270.4
2224
Female, age 72, unknown
269.8
2825
Male, age 18, unknown
268.5
2316
Male, age 76, right hemisphere
267.3
1944
Female, age 72, unknown
254.6
2667
Female, age 75, unknown
247.3
Red nucleus nTPM: 303.8
2503
Female, age 72, unknown
355.5
1865
Male, age 51, unknown
343.7
1904
Male, age 53, unknown
327.8
2785
Male, age 18, unknown
313.0
2227
Male, age 72, unknown
305.4
2769
Male, age 72, unknown
303.8
2584
Male, age 75, left hemisphere
303.7
2588
Male, age 74, left hemisphere
296.6
1821
Female, age 72, unknown
294.5
2725
Female, age 75, unknown
275.5
1954
Female, age 42, unknown
268.9
2823
Male, age 76, right hemisphere
257.8
Substantia nigra nTPM: 319.0
2699
Male, age 18, unknown
377.2
1851
Male, age 51, unknown
363.9
2665
Male, age 74, both hemispheres
350.9
1916
Female, age 42, unknown
338.5
2409
Female, age 72, unknown
336.3
2241
Male, age 72, unknown
312.8
2590
Female, age 75, unknown
303.0
1889
Female, age 72, unknown
282.4
1941
Male, age 53, unknown
272.7
2583
Male, age 75, right hemisphere
252.5
Superior colliculus nTPM: 294.6
1995
Male, age 72, unknown
333.2
2587
Male, age 74, left hemisphere
332.0
1913
Female, age 42, unknown
326.4
1796
Male, age 53, unknown
316.8
2668
Female, age 75, unknown
311.3
2664
Male, age 75, both hemispheres
289.5
2261
Male, age 18, unknown
275.1
2087
Female, age 72, unknown
261.4
1839
Male, age 51, unknown
258.5
1895
Male, age 76, right hemisphere
241.5
Ventral tegmental area nTPM: 313.7
1915
Female, age 42, unknown
350.3
2223
Female, age 72, unknown
349.4
2410
Female, age 72, unknown
311.0
2021
Male, age 53, unknown
300.5
2218
Male, age 76, both hemispheres
297.8
1942
Male, age 51, unknown
273.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
850.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 850.2
Samples: 139
Max nTPM: 2521.0
Min nTPM: 383.1
Std nTPM: 325.8
Median nTPM: 776.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
2521.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
2005.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
1849.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1810.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
1670.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
1604.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
1473.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1410.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
1397.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1363.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
1238.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
1231.3
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
1219.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1199.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
1180.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
1143.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1136.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1125.2
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
1116.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
1115.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1111.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
1087.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1079.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1078.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
1074.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
1070.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1062.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1062.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
1019.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
1018.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1018.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
1015.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
1010.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1009.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
1009.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
1000.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
998.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
990.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
973.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
957.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
949.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
947.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
945.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
942.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
939.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
937.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
926.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
924.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
908.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
907.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
906.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
899.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
894.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
878.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
869.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
855.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
851.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
849.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
846.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
837.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
833.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
832.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
806.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
799.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
799.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
796.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
794.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
791.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
787.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
776.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
773.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
773.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
768.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
767.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
765.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
761.6
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
758.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
753.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
749.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
740.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
722.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
721.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
720.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
705.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
702.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
702.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
700.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
699.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
691.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
690.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
681.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
681.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
676.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
673.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
670.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
665.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
662.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
660.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
658.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
658.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
656.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
624.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
623.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
621.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
613.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
605.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
597.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
597.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
594.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
593.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
591.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
584.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
584.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
578.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
578.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
574.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
565.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
565.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
557.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
557.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
554.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
538.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
537.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
536.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
534.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
533.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
533.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
531.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
524.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
521.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
507.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
507.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
488.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
472.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
467.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
451.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
421.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
417.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
383.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.