We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPS14
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPS14
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
Brain methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1042.6 nTPM
HPA Brain:391.0 nTPM
GTEx:1042.6 nTPM
FANTOM5:35.3 Scaled Tags Per Million
Pig:511.8 nTPM
Mouse:1292.4 nTPM
Allen mouse:12.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

391.0
Sample id Sample description nTPM
Amygdala
nTPM: 390.3
2695 Female, age 67, right hemisphere 487.6
2514 Male, age 75, right hemisphere 422.3
2517 Female, age 94, left hemisphere 366.1
1987 Female, age 91, left hemisphere 349.3
2814 Male, age 76, right hemisphere 326.2
Basal amygdala
nTPM: 325.2
2827 Female, age 67, right hemisphere 433.0
2609 Male, age 75, right hemisphere 364.2
2110 Male, age 80, left hemisphere 308.2
2685 Female, age 94, left hemisphere 306.1
1955 Male, age 76, both hemispheres 281.3
2243 Female, age 91, right hemisphere 258.5
Central amygdala
nTPM: 360.0
2826 Female, age 94, left hemisphere 536.2
2515 Male, age 75, right hemisphere 411.4
2239 Male, age 80, left hemisphere 287.3
1905 Male, age 76, both hemispheres 285.0
2701 Female, age 91, right hemisphere 279.9
Corticomedial amygdala
nTPM: 326.6
2428 Male, age 75, right hemisphere 400.1
2535 Female, age 67, right hemisphere 340.8
2429 Female, age 94, left hemisphere 333.4
2829 Male, age 80, left hemisphere 331.1
2242 Female, age 91, right hemisphere 299.4
2240 Male, age 76, both hemispheres 254.6
Lateral amygdala
nTPM: 391.0
2830 Female, age 67, right hemisphere 546.9
2516 Male, age 75, right hemisphere 470.6
2534 Female, age 94, left hemisphere 423.2
2256 Male, age 80, left hemisphere 344.9
1883 Male, age 76, both hemispheres 286.5
2255 Female, age 91, right hemisphere 274.2

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1042.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1042.6
Samples: 181

Max nTPM: 3467.7
Min nTPM: 450.7
Std nTPM: 410.3
Median nTPM: 953.4
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 3467.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 2735.7
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 2720.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 2326.9
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 2265.7
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2186.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1878.8
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1844.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1833.7
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1673.9
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 1673.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1627.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1621.3
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 1580.6
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1549.0
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1540.8
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 1512.0
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1498.5
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1472.3
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 1468.9
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1427.6
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 1362.1
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1352.0
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 1334.0
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 1332.5
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1312.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1308.6
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 1305.7
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 1287.8
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1275.0
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 1273.4
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1268.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1267.1
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 1242.1
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 1239.7
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 1234.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1222.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1222.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1218.4
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1217.9
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 1216.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1197.0
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 1187.8
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1186.9
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1186.8
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 1185.7
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 1182.5
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1181.4
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1178.9
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1171.3
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1160.9
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 1156.9
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 1156.5
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1139.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1138.5
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1136.5
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1121.4
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 1116.8
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1114.7
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 1112.4
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 1110.3
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 1107.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1102.7
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1100.7
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1087.1
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1084.7
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1081.6
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 1079.0
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1076.8
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 1072.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1069.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1050.7
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 1050.5
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 1049.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1045.5
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 1044.7
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 1037.9
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 1030.9
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1028.8
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1028.4
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 1017.4
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 1009.2
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1009.0
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 1005.1
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 990.0
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 984.1
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 976.1
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 969.4
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 965.6
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 958.1
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 953.4
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 951.5
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 948.3
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 947.7
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 933.9
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 931.7
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 930.3
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 928.8
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 926.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 922.4
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 915.9
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 914.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 910.9
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 909.7
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 907.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 891.9
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 880.6
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 875.0
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 866.4
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 866.4
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 866.1
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 866.1
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 856.1
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 855.0
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 850.6
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 845.1
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 841.2
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 838.4
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 828.1
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 823.5
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 818.7
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 815.1
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 809.8
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 806.4
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 797.1
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 790.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 790.0
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 786.7
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 779.4
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 777.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 777.2
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 775.3
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 772.9
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 772.4
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 764.7
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 762.2
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 761.8
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 759.2
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 755.9
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 753.5
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 747.8
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 747.8
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 746.4
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 741.4
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 738.8
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 733.6
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 732.9
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 726.9
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 725.1
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 725.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 724.9
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 721.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 716.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 715.2
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 709.0
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 704.9
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 701.5
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 697.3
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 696.6
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 694.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 689.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 684.1
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 681.5
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 681.3
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 677.2
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 676.6
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 672.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 671.6
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 662.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 653.8
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 652.2
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 651.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 645.2
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 636.1
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 613.6
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 611.6
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 605.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 547.0
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 531.9
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 517.1
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 450.7
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

35.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 35.3
FF:10151-102I7 76 years, female 35.3

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

511.8
Pig sample Sample description nTPM
Amygdala
nTPM: 511.8
Samples: 4

Max nTPM: 650.7
Min nTPM: 336.0
Sample A Female 650.7
Sample B Female 547.9
Sample C Male 512.6
Sample D Male 336.0

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1292.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 1292.4
Samples: 4

Max nTPM: 1404.3
Min nTPM: 1190.0
Sample A Male 1190.0
Sample B Male 1301.3
Sample C Female 1404.3
Sample D Female 1274.1

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 12.6
69012777 Antisense, RP_050309_01_E01, Mouse strain C57BL/6J (56 days, male) 12.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo