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IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:10.4 nTPM
Monaco:75.6 nTPM
Schmiedel:196.2 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

10.4
HPA sample nTPM
NK-cell
nTPM: 10.5
Samples: 6

Max nTPM: 16.3
Min nTPM: 5.9
P10809_1013 13.7
P10809_1033 12.1
P10809_1052 8.7
P10809_1071 16.3
P10809_1093 5.9
P10809_1103 6.0

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

75.6
Monaco sample nTPM
NK-cell
nTPM: 75.6
Samples: 4

Max nTPM: 84.6
Min nTPM: 56.8
RHH5316_R3683 56.8
RHH5224_R3596 80.0
RHH5253_R3625 81.1
RHH5282_R3654 84.6

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

196.2
Schmiedel sample id TPM
NK-cell
TPM: 196.2
Samples: 90

Max TPM: 312.9
Min TPM: 129.3
NK_1 312.9
NK_2 302.7
NK_3 290.9
NK_4 278.5
NK_5 274.8
NK_6 253.5
NK_7 253.3
NK_8 253.0
NK_9 249.9
NK_10 245.4
NK_11 242.7
NK_12 242.7
NK_13 238.8
NK_14 231.4
NK_15 228.2
NK_16 228.2
NK_17 225.9
NK_18 222.4
NK_19 218.1
NK_20 217.5
NK_21 217.2
NK_22 216.9
NK_23 213.6
NK_24 212.6
NK_25 212.6
NK_26 212.6
NK_27 211.6
NK_28 210.4
NK_29 208.3
NK_30 208.1
NK_31 207.8
NK_32 207.8
NK_33 205.9
NK_34 205.1
NK_35 198.9
NK_36 198.8
NK_37 197.5
NK_38 197.5
NK_39 195.8
NK_40 193.8
NK_41 193.8
NK_42 192.5
NK_43 191.1
NK_44 189.4
NK_45 188.3
NK_46 187.6
NK_47 186.6
NK_48 186.5
NK_49 186.1
NK_50 183.3
NK_51 183.1
NK_52 182.0
NK_53 181.9
NK_54 181.9
NK_55 180.3
NK_56 178.9
NK_57 177.7
NK_58 177.3
NK_59 177.3
NK_60 176.4
NK_61 176.1
NK_62 174.9
NK_63 174.9
NK_64 172.8
NK_65 172.4
NK_66 171.8
NK_67 170.5
NK_68 169.8
NK_69 168.4
NK_70 167.8
NK_71 166.9
NK_72 166.8
NK_73 166.7
NK_74 165.9
NK_75 165.6
NK_76 164.8
NK_77 163.9
NK_78 162.7
NK_79 162.2
NK_80 159.5
NK_81 156.1
NK_82 155.5
NK_83 155.1
NK_84 153.5
NK_85 150.3
NK_86 147.7
NK_87 147.5
NK_88 143.1
NK_89 132.9
NK_90 129.3
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