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  • SUMMARY

  • TISSUE

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  • MID1IP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:91.8 nTPM
HPA Brain:128.0 nTPM
GTEx:91.8 nTPM
Pig:145.8 nTPM
Mouse:112.2 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 53.1
2226 Male, age 75, left hemisphere 59.3
1961 Female, age 42, unknown 46.9
Dorsomedial nucleus
nTPM: 97.5
1989 Male, age 62, unknown 116.9
2017 Female, age 42, unknown 106.3
2041 Female, age 72, unknown 69.2
Lateral hypothalamic area
nTPM: 88.8
2412 Male, age 62, unknown 109.8
1791 Male, age 80, right hemisphere 95.9
2271 Male, age 75, both hemispheres 84.3
2228 Male, age 66, unknown 65.3
Mammillary body
nTPM: 128.0
1945 Male, age 80, right hemisphere 159.5
1834 Female, age 42, unknown 140.2
1948 Female, age 72, unknown 123.9
2413 Male, age 66, unknown 111.8
1923 Female, age 72, unknown 104.7
Paraventricular nucleus
nTPM: 100.2
2700 Male, age 62, unknown 100.2
Preoptic area
nTPM: 104.0
2414 Female, age 72, unknown 132.5
1861 Female, age 42, unknown 122.3
1907 Male, age 80, right hemisphere 57.3
Supraoptic nucleus
nTPM: 104.3
2043 Male, age 62, unknown 123.7
1894 Female, age 72, unknown 99.9
2835 Female, age 72, unknown 89.1
Ventromedial nucleus
nTPM: 56.5
1982 Female, age 72, unknown 60.5
1822 Female, age 42, unknown 52.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 91.8
Samples: 257

Max nTPM: 513.1
Min nTPM: 25.9
Std nTPM: 57.8
Median nTPM: 75.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 513.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 317.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 300.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 278.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 275.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 270.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 255.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 225.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 218.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 217.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 216.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 198.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 197.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 196.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 195.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 195.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 189.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 189.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 188.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 176.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 170.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 169.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 166.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 166.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 166.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 158.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 157.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 157.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 151.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 150.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 149.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 146.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 145.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 143.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 142.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 139.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 138.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 137.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 137.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 134.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 133.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 131.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 129.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 127.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 127.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 126.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 124.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 124.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 124.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 121.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 121.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 120.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 119.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 118.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 118.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 116.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 116.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 116.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 116.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 113.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 112.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 111.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 111.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 110.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 108.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 107.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 107.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 107.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 107.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 107.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 106.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 106.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 105.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 105.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 104.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 104.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 103.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 103.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 102.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 102.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 102.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 101.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 101.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 100.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 100.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 100.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 99.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 98.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 97.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 97.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 96.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 94.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 94.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 93.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 92.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 91.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 91.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 90.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 90.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 90.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 90.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 89.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 89.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 89.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 88.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 87.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 86.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 86.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 85.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 84.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 84.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 84.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 83.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 83.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 83.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 82.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 82.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 81.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 80.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 80.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 79.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 79.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 78.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 78.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 78.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 77.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 76.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 75.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 75.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 75.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 75.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 75.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 75.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 74.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 72.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 72.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 71.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 70.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 70.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 68.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 67.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 66.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 66.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 65.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 65.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 65.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 65.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 65.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 65.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 64.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 64.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 64.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 64.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 64.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 63.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 63.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 63.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 63.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 62.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 61.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 61.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 61.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 61.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 61.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 61.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 60.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 60.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 60.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 59.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 59.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 59.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 59.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 59.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 58.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 58.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 58.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 57.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 57.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 57.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 57.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 57.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 56.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 56.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 56.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 56.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 56.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 56.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 55.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 55.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 54.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 54.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 54.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 54.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 54.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 53.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 53.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 53.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 53.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 53.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 52.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 52.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 52.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 51.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 51.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 50.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 50.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 50.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 49.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 49.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 49.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 49.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 49.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 49.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 48.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 48.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 48.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 48.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 48.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 47.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 47.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 47.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 47.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 47.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 46.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 45.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 45.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 44.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 44.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 44.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 44.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 43.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 43.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 42.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 42.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 42.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 42.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 42.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 40.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 39.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 39.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 39.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 39.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 38.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 38.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 37.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 37.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 37.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 36.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 36.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 36.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 33.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 32.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 31.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 29.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 28.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 26.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 25.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 145.9
Samples: 4

Max nTPM: 189.9
Min nTPM: 78.0
Sample A Female 189.9
Sample B Female 162.5
Sample C Male 153.0
Sample D Male 78.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 112.2
Samples: 4

Max nTPM: 140.1
Min nTPM: 78.7
Sample A Male 134.8
Sample B Male 140.1
Sample C Female 78.7
Sample D Female 95.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.5
68269063 Antisense, RP_041208_01_H02, Mouse strain C57BL/6J (56 days, male) 0.5

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