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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1048.5
nTPM
FANTOM5:
1564.0
Scaled Tags Per Million
Pig:
778.3
nTPM
Allen mouse:
10.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
1048.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 809.9
2301
Female, age 85, both hemispheres
942.7
1984
Male, age 76, both hemispheres
897.9
2090
Male, age 80, both hemispheres
738.1
2188
Female, age 91, both hemispheres
660.8
Dorsal cochlear nucleus nTPM: 1048.5
2802
Male, age 74, right hemisphere
1273.6
2058
Male, age 76, both hemispheres
1140.5
2378
Male, age 80, both hemispheres
1125.7
2370
Male, age 61, both hemispheres
964.9
2187
Female, age 91, both hemispheres
737.9
Dorsal tegmental nucleus nTPM: 932.8
1936
Male, age 76, left hemisphere
1201.4
2083
Male, age 80, both hemispheres
980.8
2326
Male, age 74, both hemispheres
938.0
2358
Male, age 61, both hemispheres
610.9
Dorsolateral tegmental area nTPM: 801.6
2141
Male, age 76, both hemispheres
964.4
2654
Male, age 80, both hemispheres
949.3
2751
Female, age 85, both hemispheres
869.7
2360
Male, age 74, both hemispheres
826.0
2337
Male, age 61, both hemispheres
398.5
Kolliker-Fuse nucleus nTPM: 990.3
2315
Male, age 76, right hemisphere
1535.2
2163
Male, age 80, both hemispheres
774.4
2793
Female, age 91, left hemisphere
661.2
Lateral lemniscal nuclei nTPM: 587.0
2169
Male, age 76, both hemispheres
750.6
2036
Male, age 80, both hemispheres
617.5
2746
Female, age 85, left hemisphere
550.7
2320
Female, age 91, left hemisphere
541.5
2453
Male, age 74, right hemisphere
474.5
Lateral parabrachial nucleus nTPM: 821.8
2792
Male, age 76, both hemispheres
1089.6
2139
Female, age 85, right hemisphere
881.4
2013
Male, age 80, both hemispheres
858.0
2790
Male, age 61, both hemispheres
458.2
Lateral vestibular nucleus nTPM: 941.7
2184
Male, age 76, both hemispheres
1001.6
2311
Male, age 80, both hemispheres
881.9
Locus coeruleus nTPM: 936.0
2317
Female, age 72, unknown
1150.8
2720
Male, age 74, both hemispheres
970.3
2162
Male, age 80, both hemispheres
960.9
1980
Male, age 76, both hemispheres
932.4
2014
Male, age 55, unknown
864.9
2788
Male, age 74, unknown
852.3
2123
Female, age 91, both hemispheres
820.2
Medial parabrachial nucleus nTPM: 763.5
2786
Male, age 76, both hemispheres
953.6
2463
Female, age 85, right hemisphere
934.0
2854
Male, age 80, both hemispheres
644.8
2170
Female, age 91, both hemispheres
642.6
2156
Male, age 61, both hemispheres
642.3
Medial periolivary nuclei nTPM: 578.5
2063
Male, age 76, both hemispheres
743.6
2791
Male, age 74, right hemisphere
603.7
2081
Male, age 80, both hemispheres
563.6
2458
Female, age 91, both hemispheres
537.2
2171
Female, age 85, both hemispheres
444.3
Motor facial nucleus nTPM: 646.2
2795
Female, age 91, both hemispheres
828.4
2062
Male, age 76, both hemispheres
799.7
2697
Female, age 85, both hemispheres
596.2
2126
Male, age 61, both hemispheres
588.7
2365
Male, age 74, right hemisphere
567.4
2327
Male, age 80, both hemispheres
496.7
Motor trigeminal nucleus nTPM: 629.2
2309
Male, age 76, both hemispheres
925.1
2335
Male, age 61, both hemispheres
606.3
2560
Male, age 74, both hemispheres
594.0
2321
Female, age 91, both hemispheres
545.0
2079
Male, age 80, both hemispheres
475.5
Nuclei of the trapezoid body nTPM: 610.8
1983
Male, age 76, both hemispheres
764.5
2368
Female, age 91, both hemispheres
699.7
2166
Male, age 80, both hemispheres
645.1
2159
Male, age 61, both hemispheres
522.4
2735
Female, age 85, both hemispheres
422.2
Nucleus raphe magnus nTPM: 523.1
2051
Male, age 76, both hemispheres
723.4
2328
Male, age 80, both hemispheres
679.4
2455
Male, age 74, both hemispheres
532.6
2459
Female, age 91, both hemispheres
506.0
2160
Male, age 61, both hemispheres
407.7
2172
Female, age 85, both hemispheres
289.4
Paramedian reticular nucleus nTPM: 636.3
2057
Male, age 80, both hemispheres
710.5
2052
Male, age 76, both hemispheres
709.0
2313
Male, age 61, both hemispheres
616.1
2050
Female, age 85, both hemispheres
509.5
Pedunculopontine tegmental nucleus nTPM: 881.1
1921
Female, age 85, both hemispheres
1199.8
2334
Male, age 80, both hemispheres
978.0
2338
Male, age 61, both hemispheres
465.4
Pontine nuclei nTPM: 512.0
1968
Male, age 76, left hemisphere
737.4
2115
Male, age 80, left hemisphere
668.6
2319
Female, age 91, both hemispheres
575.2
1863
Male, age 55, unknown
523.5
2109
Female, age 72, unknown
458.9
2454
Male, age 74, left hemisphere
426.2
2787
Female, age 85, both hemispheres
369.9
2727
Male, age 61, right hemisphere
336.3
Pontine raphe nucleus nTPM: 820.3
2853
Male, age 76, midline
1052.8
2122
Female, age 85, midline
587.9
Posteroventral cochlear nucleus nTPM: 835.0
2371
Male, age 61, both hemispheres
1154.3
2070
Male, age 76, both hemispheres
826.2
2341
Male, age 80, both hemispheres
779.3
2752
Female, age 85, both hemispheres
762.6
2135
Female, age 91, both hemispheres
652.9
Principal sensory trigeminal nucleus nTPM: 649.8
2324
Male, age 76, both hemispheres
1170.6
2158
Male, age 61, both hemispheres
490.4
2367
Female, age 91, left hemisphere
475.4
2008
Male, age 80, left hemisphere
462.8
Reticular pontine nucleus, caudal nTPM: 607.6
2092
Male, age 76, both hemispheres
851.6
2559
Male, age 74, both hemispheres
570.6
2457
Female, age 91, both hemispheres
550.0
2332
Male, age 80, right hemisphere
458.1
Reticular pontine nucleus, oral nTPM: 732.3
2167
Male, age 76, both hemispheres
1061.3
1939
Male, age 80, both hemispheres
925.7
2366
Female, age 91, both hemispheres
678.2
2012
Female, age 85, both hemispheres
659.2
2361
Male, age 74, both hemispheres
337.0
Reticulotegmental nucleus nTPM: 795.2
2325
Male, age 76, both hemispheres
862.4
2333
Male, age 80, both hemispheres
789.8
2452
Male, age 74, both hemispheres
782.5
2322
Female, age 91, both hemispheres
746.0
Spinal trigeminal nucleus, oral nTPM: 811.6
1978
Male, age 76, both hemispheres
958.0
2737
Female, age 85, both hemispheres
766.8
2164
Male, age 80, both hemispheres
710.0
Subcoeruleus area nTPM: 851.4
2451
Male, age 74, both hemispheres
1120.1
2369
Female, age 85, left hemisphere
882.0
2323
Female, age 91, left hemisphere
825.5
1958
Male, age 80, both hemispheres
715.9
2089
Male, age 76, left hemisphere
713.5
Superior olive nTPM: 613.5
2020
Male, age 76, both hemispheres
838.1
2329
Male, age 80, right hemisphere
618.9
2364
Male, age 74, right hemisphere
588.3
2561
Female, age 91, both hemispheres
567.7
1875
Female, age 85, both hemispheres
454.5
Ventral periolivary nuclei nTPM: 622.8
2023
Male, age 76, both hemispheres
792.2
2165
Male, age 80, both hemispheres
626.1
2130
Female, age 85, both hemispheres
587.6
2794
Female, age 91, left hemisphere
485.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 682.7
2359
Male, age 61, both hemispheres
778.5
2456
Female, age 91, both hemispheres
731.8
1959
Male, age 76, both hemispheres
707.9
2161
Male, age 80, both hemispheres
687.6
2840
Female, age 85, both hemispheres
674.7
2449
Male, age 74, both hemispheres
515.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
778.3
Pig sample
Sample description
nTPM
Pons nTPM: 778.3
Samples: 4
Max nTPM: 904.2
Min nTPM: 638.6
Sample A
Female
813.2
Sample B
Female
638.6
Sample C
Male
904.2
Sample D
Male
757.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.