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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
High
Neuronal cells:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1457.1
nTPM
HPA Brain:
962.6
nTPM
GTEx:
1457.1
nTPM
FANTOM5:
1817.3
Scaled Tags Per Million
Pig:
453.1
nTPM
Mouse:
868.8
nTPM
Allen mouse:
11.1
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA002896
Antibody HPA003590
Antibody CAB017491
Glial cells
Medium
High
Medium
Neuronal cells
Not detected
Low
Not detected
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
962.6
Sample id
Sample description
nTPM
Hippocampus nTPM: 962.2
1911
Female, age 85, right hemisphere
1088.7
2529
Female, age 94, left hemisphere
1083.1
2148
Female, age 91, left hemisphere
1057.4
1898
Male, age 80, left hemisphere
932.8
2621
Female, age 67, right hemisphere
839.5
1855
Male, age 76, left hemisphere
771.9
Dentate gyrus nTPM: 772.2
2528
Male, age 74, both hemispheres
952.8
2246
Female, age 85, both hemispheres
850.3
2530
Female, age 94, left hemisphere
801.5
1927
Female, age 91, both hemispheres
691.0
2531
Female, age 67, both hemispheres
682.5
2010
Male, age 76, both hemispheres
654.7
Entorhinal gyrus nTPM: 842.3
2117
Female, age 91, right hemisphere
1233.0
1938
Female, age 85, left hemisphere
974.5
2686
Male, age 75, right hemisphere
856.7
2764
Male, age 80, right hemisphere
785.1
1787
Male, age 76, left hemisphere
635.7
2613
Female, age 94, left hemisphere
568.4
Hippocampus, CA1 nTPM: 765.1
2527
Male, age 74, both hemispheres
1019.9
1873
Female, age 85, both hemispheres
968.0
2082
Female, age 91, right hemisphere
857.5
2749
Male, age 80, left hemisphere
524.8
2045
Male, age 76, both hemispheres
455.5
Hippocampus, CA2 nTPM: 765.5
2113
Female, age 91, right hemisphere
964.6
2249
Male, age 74, both hemispheres
866.1
1963
Male, age 80, left hemisphere
854.9
2437
Female, age 94, left hemisphere
766.7
1940
Female, age 85, left hemisphere
675.7
1892
Male, age 76, both hemispheres
465.1
Hippocampus, CA3 nTPM: 737.6
1891
Female, age 85, both hemispheres
995.6
2861
Female, age 67, both hemispheres
956.7
2436
Male, age 74, both hemispheres
668.1
2620
Female, age 94, left hemisphere
662.9
1867
Male, age 76, both hemispheres
599.1
2137
Male, age 80, left hemisphere
543.3
Parahippocampal cortex nTPM: 822.9
2692
Male, age 74, both hemispheres
1071.6
1933
Female, age 85, both hemispheres
1002.6
2622
Female, age 67, right hemisphere
977.1
2245
Female, age 91, both hemispheres
860.9
1990
Female, age 91, right hemisphere
803.0
1850
Male, age 80, both hemispheres
785.6
2250
Female, age 67, right hemisphere
767.2
2532
Female, age 72, left hemisphere
700.1
2018
Male, age 76, both hemispheres
635.8
2693
Female, age 94, both hemispheres
625.4
Perirhinal gyrus nTPM: 653.7
1847
Female, age 91, left hemisphere
833.9
1794
Male, age 80, right hemisphere
735.5
1841
Female, age 85, right hemisphere
677.4
2521
Female, age 94, right hemisphere
525.2
2848
Male, age 76, right hemisphere
496.5
Subiculum nTPM: 962.6
2729
Female, age 91, right hemisphere
1172.2
2438
Female, age 94, left hemisphere
1096.2
2619
Male, age 74, both hemispheres
1013.9
1901
Male, age 80, both hemispheres
873.5
2042
Male, age 76, both hemispheres
820.5
1977
Female, age 85, both hemispheres
799.1
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1457.1
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 1457.1
Samples: 197
Max nTPM: 3490.5
Min nTPM: 161.5
Std nTPM: 530.6
Median nTPM: 1406.6
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
3490.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
3065.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
3003.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
2886.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
2803.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
2647.8
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
2560.5
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
2558.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
2469.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
2446.0
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
2427.8
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
2421.5
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
2415.7
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
2411.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
2294.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
2208.0
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
2203.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
2189.9
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
2154.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
2149.2
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
2075.6
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
2069.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
2049.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
2048.0
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
2012.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
2010.4
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
2006.0
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
1999.9
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
1990.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
1986.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
1981.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
1955.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
1927.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
1921.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
1875.6
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
1868.5
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
1863.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
1859.7
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
1850.3
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
1846.1
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
1824.4
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
1817.0
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
1803.3
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
1801.9
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
1793.3
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
1785.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
1782.3
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
1779.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
1774.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
1756.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
1756.1
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
1733.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
1732.9
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
1724.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
1677.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
1671.2
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
1664.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
1662.5
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
1661.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
1661.0
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
1653.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
1649.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
1641.8
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
1634.3
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
1628.7
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
1623.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
1617.4
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
1616.4
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1615.3
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
1596.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
1594.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
1586.5
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
1580.0
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
1577.5
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
1577.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
1558.0
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
1556.0
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
1554.7
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
1545.6
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
1545.2
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
1531.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
1527.8
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
1499.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1498.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
1491.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
1487.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1486.0
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
1476.5
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
1471.4
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
1468.8
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
1456.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
1453.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
1452.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
1442.6
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1432.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
1432.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1430.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
1427.1
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
1406.6
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
1401.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
1396.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
1393.3
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
1387.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
1371.9
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
1370.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
1363.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
1354.0
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
1346.4
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
1345.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
1341.4
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
1328.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
1325.9
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
1320.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1305.4
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
1296.3
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
1281.4
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
1280.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
1279.4
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
1254.3
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
1251.8
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
1245.0
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
1227.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
1210.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
1199.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
1178.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
1177.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
1174.7
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
1172.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
1171.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
1170.0
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
1157.8
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
1151.6
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
1151.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
1142.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
1136.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
1130.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
1119.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
1114.7
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
1113.8
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
1111.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
1108.9
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
1103.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
1103.2
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
1092.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
1091.7
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
1089.2
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
1086.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
1081.3
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
1076.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
1076.6
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
1065.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
1064.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
1062.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
1054.3
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
1051.9
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
1028.3
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
1022.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
1018.1
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
1017.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1015.1
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
1006.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
1004.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
995.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
994.3
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
990.9
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
988.5
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
960.5
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
959.7
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
955.2
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
944.4
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
935.7
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
931.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
927.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
922.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
907.2
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
898.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
897.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
897.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
893.4
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
891.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
875.7
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
819.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
812.8
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
794.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
775.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
744.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
744.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
718.0
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
712.4
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
602.0
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
566.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
552.1
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
544.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
519.2
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
503.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
449.1
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
161.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
868.8
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 868.8
Samples: 4
Max nTPM: 1016.4
Min nTPM: 752.2
Sample A
Male
869.0
Sample B
Male
752.2
Sample C
Female
1016.4
Sample D
Female
837.6
Hippocampal formation nTPM: 768.2
Samples: 4
Max nTPM: 921.5
Min nTPM: 646.5
Sample A
Male
921.5
Sample B
Male
660.8
Sample C
Female
646.5
Sample D
Female
843.9
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.