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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:584.1 nTPM
HPA Brain:1104.1 nTPM
GTEx:584.1 nTPM
Pig:506.4 nTPM
Mouse:745.4 nTPM
Allen mouse:19.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1104.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 524.2
2226 Male, age 75, left hemisphere 621.2
1961 Female, age 42, unknown 427.3
Dorsomedial nucleus
nTPM: 756.0
1989 Male, age 62, unknown 1253.5
2017 Female, age 42, unknown 540.5
2041 Female, age 72, unknown 473.9
Lateral hypothalamic area
nTPM: 570.6
1791 Male, age 80, right hemisphere 711.4
2271 Male, age 75, both hemispheres 624.0
2228 Male, age 66, unknown 522.3
2412 Male, age 62, unknown 424.8
Mammillary body
nTPM: 1104.1
1923 Female, age 72, unknown 1713.5
1834 Female, age 42, unknown 1057.9
2413 Male, age 66, unknown 954.8
1945 Male, age 80, right hemisphere 897.5
1948 Female, age 72, unknown 896.8
Paraventricular nucleus
nTPM: 458.3
2700 Male, age 62, unknown 458.3
Preoptic area
nTPM: 560.8
1861 Female, age 42, unknown 673.5
2414 Female, age 72, unknown 554.0
1907 Male, age 80, right hemisphere 454.8
Supraoptic nucleus
nTPM: 671.2
1894 Female, age 72, unknown 761.7
2043 Male, age 62, unknown 676.4
2835 Female, age 72, unknown 575.5
Ventromedial nucleus
nTPM: 404.2
1982 Female, age 72, unknown 449.0
1822 Female, age 42, unknown 359.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

584.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 584.1
Samples: 257

Max nTPM: 1781.9
Min nTPM: 191.5
Std nTPM: 211.1
Median nTPM: 539.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1781.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1426.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1325.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1281.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1159.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1151.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1142.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1133.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1108.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1066.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1020.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1013.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 993.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 961.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 954.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 943.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 938.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 924.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 905.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 881.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 877.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 847.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 847.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 845.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 825.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 812.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 811.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 806.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 800.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 798.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 793.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 787.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 786.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 780.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 762.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 758.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 757.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 756.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 752.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 751.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 749.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 747.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 745.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 743.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 735.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 734.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 734.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 729.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 727.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 727.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 718.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 715.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 710.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 708.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 704.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 703.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 695.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 693.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 690.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 688.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 686.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 684.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 681.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 680.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 675.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 672.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 671.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 671.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 667.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 667.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 667.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 662.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 661.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 660.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 657.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 656.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 644.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 644.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 640.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 639.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 636.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 634.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 631.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 631.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 628.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 623.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 623.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 619.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 618.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 618.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 618.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 616.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 614.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 613.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 613.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 612.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 609.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 608.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 607.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 605.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 604.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 602.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 597.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 596.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 596.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 593.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 591.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 584.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 582.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 581.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 575.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 575.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 574.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 573.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 569.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 566.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 566.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 565.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 565.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 555.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 555.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 554.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 553.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 550.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 549.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 547.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 546.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 544.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 539.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 539.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 539.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 537.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 536.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 534.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 533.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 532.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 528.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 528.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 527.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 524.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 519.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 516.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 516.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 515.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 515.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 514.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 514.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 513.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 508.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 508.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 505.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 503.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 503.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 502.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 500.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 500.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 500.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 497.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 496.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 494.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 493.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 489.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 488.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 486.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 483.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 482.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 482.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 481.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 480.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 480.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 477.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 474.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 474.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 471.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 470.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 470.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 470.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 468.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 465.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 464.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 463.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 463.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 462.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 461.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 460.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 456.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 455.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 455.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 454.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 451.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 450.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 450.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 448.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 447.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 445.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 442.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 441.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 438.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 435.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 434.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 432.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 431.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 431.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 426.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 423.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 423.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 415.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 414.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 414.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 414.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 414.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 413.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 412.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 410.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 409.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 408.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 408.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 403.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 403.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 399.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 398.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 397.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 391.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 389.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 388.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 384.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 384.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 382.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 382.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 378.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 377.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 374.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 367.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 365.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 356.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 353.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 351.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 347.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 346.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 342.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 335.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 334.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 334.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 333.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 327.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 325.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 323.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 308.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 305.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 303.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 293.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 288.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 280.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 271.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 251.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 238.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 191.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

506.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 506.4
Samples: 4

Max nTPM: 627.1
Min nTPM: 336.9
Sample A Female 627.1
Sample B Female 539.4
Sample C Male 522.3
Sample D Male 336.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

745.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 745.4
Samples: 4

Max nTPM: 909.0
Min nTPM: 602.1
Sample A Male 788.0
Sample B Male 909.0
Sample C Female 602.1
Sample D Female 682.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 19.7
70927826 Antisense, RP_050725_01_B02, Mouse strain C57BL/6J (56 days, male) 20.7
393211 Antisense, RP_040804_02_D11, Mouse strain C57BL/6J (56 days, male) 18.7

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