HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:45.9 nTPM
HPA Brain:166.9 nTPM
GTEx:45.9 nTPM
FANTOM5:112.0 Scaled Tags Per Million
Pig:355.7 nTPM
Mouse:134.9 nTPM
Allen mouse:10.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 166.9
Sample id Sample description nTPM
Hippocampus
nTPM: 124.8
1855 Male, age 76, left hemisphere 166.1
1898 Male, age 80, left hemisphere 165.7
2621 Female, age 67, right hemisphere 148.0
2148 Female, age 91, left hemisphere 134.7
1911 Female, age 85, right hemisphere 86.0
2529 Female, age 94, left hemisphere 48.3
Dentate gyrus
nTPM: 132.3
1927 Female, age 91, both hemispheres 205.4
2010 Male, age 76, both hemispheres 159.0
2530 Female, age 94, left hemisphere 115.1
2528 Male, age 74, both hemispheres 106.8
2246 Female, age 85, both hemispheres 106.7
2531 Female, age 67, both hemispheres 100.9
Entorhinal gyrus
nTPM: 122.0
2613 Female, age 94, left hemisphere 186.6
1938 Female, age 85, left hemisphere 157.4
1787 Male, age 76, left hemisphere 123.2
2764 Male, age 80, right hemisphere 120.5
2686 Male, age 75, right hemisphere 86.2
2117 Female, age 91, right hemisphere 58.0
Hippocampus, CA1
nTPM: 166.9
2749 Male, age 80, left hemisphere 372.5
1873 Female, age 85, both hemispheres 149.2
2045 Male, age 76, both hemispheres 114.9
2527 Male, age 74, both hemispheres 110.5
2082 Female, age 91, right hemisphere 87.1
Hippocampus, CA2
nTPM: 130.0
1963 Male, age 80, left hemisphere 197.0
1892 Male, age 76, both hemispheres 181.7
1940 Female, age 85, left hemisphere 109.1
2249 Male, age 74, both hemispheres 101.9
2113 Female, age 91, right hemisphere 100.1
2437 Female, age 94, left hemisphere 90.4
Hippocampus, CA3
nTPM: 126.6
2137 Male, age 80, left hemisphere 247.6
2861 Female, age 67, both hemispheres 123.1
1867 Male, age 76, both hemispheres 114.7
2620 Female, age 94, left hemisphere 109.0
2436 Male, age 74, both hemispheres 95.0
1891 Female, age 85, both hemispheres 70.6
Parahippocampal cortex
nTPM: 121.1
2245 Female, age 91, both hemispheres 173.2
1990 Female, age 91, right hemisphere 157.1
1850 Male, age 80, both hemispheres 134.0
2250 Female, age 67, right hemisphere 128.5
1933 Female, age 85, both hemispheres 122.3
2693 Female, age 94, both hemispheres 118.4
2532 Female, age 72, left hemisphere 110.2
2018 Male, age 76, both hemispheres 101.8
2692 Male, age 74, both hemispheres 85.2
2622 Female, age 67, right hemisphere 80.7
Perirhinal gyrus
nTPM: 164.8
1847 Female, age 91, left hemisphere 256.0
2521 Female, age 94, right hemisphere 194.7
1794 Male, age 80, right hemisphere 130.7
1841 Female, age 85, right hemisphere 125.0
2848 Male, age 76, right hemisphere 117.3
Subiculum
nTPM: 86.5
1901 Male, age 80, both hemispheres 118.4
1977 Female, age 85, both hemispheres 107.7
2042 Male, age 76, both hemispheres 98.7
2729 Female, age 91, right hemisphere 72.3
2619 Male, age 74, both hemispheres 66.0
2438 Female, age 94, left hemisphere 56.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 45.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.9
Samples: 255

Max nTPM: 187.1
Min nTPM: 0.5
Std nTPM: 38.0
Median nTPM: 36.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 187.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 171.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 167.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 156.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 156.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 147.5
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 133.6
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 130.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 127.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 127.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 126.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 112.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.0
FF:10169-103B7 60 years, female 154.7
FF:10153-102I9 76 years, female 69.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 355.7
Pig sample Sample description nTPM
Subiculum
nTPM: 149.5
Samples: 4

Max nTPM: 174.6
Min nTPM: 126.2
Sample A Female 164.1
Sample B Female 133.0
Sample C Male 174.6
Sample D Male 126.2
Dorsal hippocampus
nTPM: 355.8
Samples: 4

Max nTPM: 491.5
Min nTPM: 206.2
Sample A Female 469.8
Sample B Female 491.5
Sample C Male 206.2
Sample D Male 255.5
Entorhinal cortex
nTPM: 111.1
Samples: 4

Max nTPM: 124.3
Min nTPM: 91.5
Sample A Female 123.1
Sample B Female 91.5
Sample C Male 124.3
Sample D Male 105.3
Ventral hippocampus
nTPM: 307.6
Samples: 4

Max nTPM: 511.9
Min nTPM: 160.8
Sample A Female 284.8
Sample B Female 160.8
Sample C Male 272.8
Sample D Male 511.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 134.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.7
Samples: 4

Max nTPM: 86.0
Min nTPM: 54.1
Sample A Male 61.7
Sample B Male 54.1
Sample C Female 86.0
Sample D Female 81.1
Hippocampal formation
nTPM: 134.9
Samples: 4

Max nTPM: 161.6
Min nTPM: 110.1
Sample A Male 117.6
Sample B Male 150.4
Sample C Female 161.6
Sample D Female 110.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
68797529 Antisense, RP_050210_02_E10, Mouse strain C57BL/6J (56 days, male) 17.5
71064082 Antisense, RP_050725_03_D01, Mouse strain C57BL/6J (56 days, male) 12.7
73512195 Antisense, RP_050712_03_D11, Mouse strain C57BL/6J (56 days, male) 7.7
79762688 Antisense, RP_071204_04_D08, Mouse strain C57BL/6J (56 days, male) 5.1

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