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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • PRDX2
EVOLUTIONARY LIVER Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Liver & Gallbladder
Evolutionary methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Medium
Hepatocytes: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:313.2 nTPM
HPA:210.5 nTPM
GTEx:313.2 nTPM
FANTOM5:552.8 Scaled Tags Per Million
Macaque:56.9 nTPM
Pig:70.0 nTPM
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody CAB008713Antibody CAB080246
Cholangiocytes MediumHigh
Hepatocytes MediumHigh





LIVER - PROTEINTALKS DB MS
Median intensity 224079
Sample Intensity
Liver_01
379242
Liver_02
44815
Liver_03
363350
Liver_04
508979
Liver_05
445152
Liver_06
574294
Liver_07
72218
Liver_08
76673
Liver_09
84808
Liver_10
58263

LIVER - MANN MS
Median intensity 1240845301
Replicate Intensity
Liver_01
1321670932
Liver_02
1193306694
Liver_03
1240845301

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

210.5
N/A
Female, age 60
Liver sample 21
nTPM: 288.9
overview
Male, age 54
Liver sample 23
nTPM: 229.8
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 276.6
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 110.1
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 145.7
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 262.2
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 218.4
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 238.5
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 153.4
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 181.1
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

313.2
GTEx sample id Sample description nTPM
Liver
Average nTPM: 313.2
Samples: 262

Max nTPM: 566.3
Min nTPM: 128.2
Std nTPM: 85.0
Median nTPM: 307.4
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 566.3
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 555.4
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 533.8
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 527.1
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 497.2
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 492.5
GTEX-REY6-1226-SM-48FDR 60-69 years, male 485.9
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 473.0
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 468.5
GTEX-P78B-1326-SM-3P611 40-49 years, female 466.2
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 461.4
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 458.6
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 458.1
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 454.3
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 445.8
GTEX-QESD-2026-SM-447BI 20-29 years, male 444.4
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 440.4
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 440.3
GTEX-R53T-0326-SM-48FEC 50-59 years, female 436.7
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 433.5
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 432.9
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 432.7
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 431.7
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 427.3
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 425.7
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 425.4
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 424.8
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 420.9
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 420.3
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 420.2
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 418.6
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 418.0
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 416.8
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 416.6
GTEX-13113-1326-SM-5GCOI 60-69 years, female 415.0
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 413.5
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 411.0
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 410.4
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 410.1
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 408.5
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 408.2
GTEX-14JG1-1626-SM-664NH 40-49 years, male 408.1
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 405.5
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 404.5
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 404.5
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 402.0
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 401.9
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 401.3
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 400.6
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 398.9
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 398.1
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 395.9
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 394.6
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 394.3
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 393.2
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 392.8
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 392.4
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 391.4
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 390.7
GTEX-QEL4-1226-SM-447A4 50-59 years, male 384.5
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 381.4
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 381.1
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 376.9
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 376.9
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 376.5
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 376.1
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 375.2
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 374.6
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 371.3
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 370.9
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 370.0
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 368.1
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 368.0
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 367.9
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 367.3
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 367.1
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 366.6
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 366.3
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 365.7
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 364.4
GTEX-X261-1726-SM-4PQYT 50-59 years, male 361.6
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 359.9
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 356.0
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 354.9
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 351.4
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 351.0
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 349.7
GTEX-17HHE-0126-SM-79398 50-59 years, male 349.6
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 348.5
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 347.6
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 347.2
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 347.1
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 346.4
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 343.8
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 343.2
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 341.5
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 340.1
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 340.0
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 340.0
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 338.6
GTEX-14E7W-1526-SM-6871X 70-79 years, male 338.2
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 336.6
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 336.2
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 335.2
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 335.2
GTEX-18A7A-1526-SM-72D69 50-59 years, female 332.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 331.8
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 329.6
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 328.2
GTEX-14PHX-0526-SM-664NW 50-59 years, male 327.6
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 327.3
GTEX-Q734-0326-SM-48U15 40-49 years, female 324.9
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 323.5
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 323.2
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 321.7
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 320.7
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 319.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 318.9
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 318.3
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 317.6
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 315.4
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 314.9
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 314.6
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 314.5
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 313.1
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 313.0
GTEX-12696-0826-SM-5EGGE 60-69 years, male 312.8
GTEX-YECK-1926-SM-4W21H 60-69 years, male 310.2
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 310.1
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 307.5
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 307.4
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 307.4
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 307.0
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 304.8
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 303.6
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 301.5
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 300.4
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 300.0
GTEX-18A66-2026-SM-7189C 60-69 years, male 299.5
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 299.2
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 298.9
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 298.2
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 296.8
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 295.2
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 292.8
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 292.3
GTEX-S32W-1926-SM-4AD63 50-59 years, female 292.2
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 291.8
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 289.6
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 287.7
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 287.6
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 287.1
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 286.0
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 285.7
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 285.5
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 285.0
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 282.1
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 281.6
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 281.6
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 281.3
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 278.1
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 275.4
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 274.3
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 273.8
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 272.5
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 271.9
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 271.7
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 271.6
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 270.0
GTEX-O5YV-0726-SM-EV798 60-69 years, female 269.1
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 268.2
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 267.9
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 266.1
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 264.1
GTEX-RN64-1826-SM-48FDV 50-59 years, male 261.9
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 261.6
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 261.3
GTEX-1399T-0826-SM-5IFES 60-69 years, male 260.2
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 259.6
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 258.6
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 257.9
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 257.4
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 257.1
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 254.1
GTEX-17F96-1226-SM-79OK2 70-79 years, male 253.3
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 252.2
GTEX-S33H-1626-SM-4AD68 30-39 years, male 251.5
GTEX-11ZUS-2526-SM-59872 30-39 years, male 250.6
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 249.7
GTEX-13112-1426-SM-5EGH8 50-59 years, male 249.6
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 248.5
GTEX-1B932-1426-SM-793AN 40-49 years, female 248.2
GTEX-18465-1626-SM-7LG6N 50-59 years, male 247.5
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 247.4
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 247.1
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 246.8
GTEX-111FC-1226-SM-HAV27 60-69 years, male 246.5
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 246.4
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 245.2
GTEX-11GSP-0626-SM-5986T 60-69 years, female 243.5
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 239.6
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 239.5
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 238.5
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 237.6
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 237.5
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 236.8
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 234.8
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 234.1
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 233.7
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 232.1
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 231.2
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 230.4
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 229.7
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 229.5
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 229.5
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 228.5
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 227.8
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 227.6
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 227.1
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 226.6
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 226.1
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 223.4
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 223.1
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 222.7
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 222.6
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 218.8
GTEX-14PJO-1726-SM-68719 60-69 years, male 217.9
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 217.0
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 216.2
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 214.1
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 213.9
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 213.3
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 212.9
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 210.4
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 207.9
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 207.4
GTEX-14XAO-0226-SM-68728 60-69 years, female 207.2
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 204.6
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 203.8
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 203.2
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 203.1
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 202.8
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 201.1
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 197.6
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 197.4
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 194.0
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 192.6
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 192.0
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 190.0
GTEX-1B933-1226-SM-731DW 50-59 years, female 189.4
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 187.9
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 185.9
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 185.5
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 183.9
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 180.3
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 177.5
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 168.9
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 163.8
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 161.0
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 153.1
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 147.7
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 128.2
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

552.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 552.8
FF:10018-101C9 64,69,70 years, mixed 552.8

LIVER - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.9
Macaque sample Sample description nTPM
Liver
nTPM: 56.9
Samples: 3

Max nTPM: 61.9
Min nTPM: 47.7
Sample B 61.9
Sample C 61.1
Sample D 47.7

LIVER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.0
Pig sample Sample description nTPM
Liver
nTPM: 70.0
Samples: 4

Max nTPM: 95.1
Min nTPM: 49.6
Sample A Female 84.3
Sample B Female 51.0
Sample C Male 49.6
Sample D Male 95.1

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