PRDX2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • PRDX2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:241.4 nTPM
GTEx:361.4 nTPM
FANTOM5:265.4 Scaled Tags Per Million
Macaque:103.4 nTPM
Pig:391.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

241.4
Sample id Sample description nTPM
Putamen
nTPM: 241.4
2482 Female, age 94, left hemisphere 330.5
1937 Female, age 91, right hemisphere 281.9
2466 Female, age 79, unknown 257.0
1838 Male, age 80, right hemisphere 255.3
1829 Male, age 74, unknown 202.2
2647 Male, age 75, left hemisphere 198.9
2489 Female, age 72, unknown 164.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

361.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 361.4
Samples: 254

Max nTPM: 662.3
Min nTPM: 147.0
Std nTPM: 81.5
Median nTPM: 353.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 662.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 649.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 638.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 623.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 618.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 602.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 562.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 562.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 558.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 554.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 551.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 550.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 515.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 514.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 510.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 508.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 492.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 490.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 482.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 475.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 463.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 461.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 455.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 454.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 452.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 451.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 446.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 443.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 441.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 440.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 439.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 435.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 434.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 433.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 430.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 428.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 428.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 428.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 428.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 427.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 425.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 423.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 423.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 422.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 421.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 420.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 419.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 418.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 417.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 416.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 415.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 414.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 413.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 413.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 410.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 409.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 408.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 408.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 407.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 406.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 405.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 405.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 405.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 404.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 403.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 402.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 399.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 399.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 398.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 395.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 394.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 394.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 393.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 392.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 392.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 391.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 389.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 388.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 388.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 387.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 387.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 386.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 384.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 383.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 381.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 380.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 380.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 379.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 378.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 378.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 377.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 377.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 375.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 375.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 375.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 374.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 372.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 372.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 372.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 370.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 370.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 370.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 368.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 368.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 368.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 368.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 367.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 366.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 366.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 365.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 365.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 365.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 363.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 361.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 361.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 361.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 359.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 358.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 356.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 356.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 355.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 354.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 354.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 354.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 354.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 353.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 353.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 353.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 352.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 352.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 351.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 351.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 350.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 347.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 347.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 347.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 346.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 343.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 343.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 342.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 342.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 341.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 341.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 341.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 340.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 339.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 336.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 336.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 335.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 335.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 334.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 331.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 329.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 329.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 328.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 328.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 328.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 328.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 327.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 327.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 327.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 327.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 325.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 325.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 324.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 323.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 323.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 323.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 322.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 322.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 321.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 321.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 321.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 319.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 319.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 318.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 318.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 317.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 316.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 316.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 315.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 314.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 314.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 313.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 312.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 311.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 311.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 310.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 310.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 309.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 308.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 307.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 305.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 304.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 303.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 303.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 303.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 302.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 302.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 300.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 300.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 300.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 299.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 297.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 296.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 295.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 293.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 291.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 291.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 291.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 290.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 290.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 289.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 289.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 288.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 288.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 288.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 287.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 287.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 286.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 285.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 285.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 284.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 283.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 282.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 282.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 280.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 279.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 277.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 276.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 276.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 276.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 274.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 274.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 268.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 267.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 267.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 263.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 262.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 260.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 255.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 252.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 248.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 245.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 242.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 232.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 231.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 230.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 226.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 220.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 198.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 181.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 180.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 147.0
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

265.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 265.4
FF:10176-103C5 60 years, female 265.4

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.4
Macaque sample Sample description nTPM
Putamen
nTPM: 103.4
Samples: 2

Max nTPM: 131.7
Min nTPM: 75.0
Sample A 75.0
Sample B 131.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

391.6
Pig sample Sample description nTPM
Putamen
nTPM: 391.6
Samples: 3

Max nTPM: 520.2
Min nTPM: 290.2
Sample B Female 290.2
Sample C Male 520.2
Sample D Male 364.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.