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  • SUMMARY

  • TISSUE

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  • BSCL2
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:274.6 nTPM
HPA Brain:596.5 nTPM
GTEx:274.6 nTPM
Pig:180.5 nTPM
Mouse:103.6 nTPM
Allen mouse:6.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

596.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 596.5
2226 Male, age 75, left hemisphere 876.6
1961 Female, age 42, unknown 316.3
Dorsomedial nucleus
nTPM: 233.9
2041 Female, age 72, unknown 292.9
1989 Male, age 62, unknown 207.4
2017 Female, age 42, unknown 201.4
Lateral hypothalamic area
nTPM: 424.8
2228 Male, age 66, unknown 548.2
1791 Male, age 80, right hemisphere 436.8
2271 Male, age 75, both hemispheres 419.8
2412 Male, age 62, unknown 294.3
Mammillary body
nTPM: 171.9
1923 Female, age 72, unknown 246.3
2413 Male, age 66, unknown 195.0
1948 Female, age 72, unknown 152.8
1945 Male, age 80, right hemisphere 135.2
1834 Female, age 42, unknown 130.4
Paraventricular nucleus
nTPM: 233.2
2700 Male, age 62, unknown 233.2
Preoptic area
nTPM: 230.7
1907 Male, age 80, right hemisphere 317.9
2414 Female, age 72, unknown 190.2
1861 Female, age 42, unknown 184.0
Supraoptic nucleus
nTPM: 262.7
2835 Female, age 72, unknown 353.1
2043 Male, age 62, unknown 218.2
1894 Female, age 72, unknown 216.7
Ventromedial nucleus
nTPM: 303.7
1982 Female, age 72, unknown 323.8
1822 Female, age 42, unknown 283.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

274.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 274.6
Samples: 257

Max nTPM: 778.0
Min nTPM: 44.4
Std nTPM: 137.9
Median nTPM: 256.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 778.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 716.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 612.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 593.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 581.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 569.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 552.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 541.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 534.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 534.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 532.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 519.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 513.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 508.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 495.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 493.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 491.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 486.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 485.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 481.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 477.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 477.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 475.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 469.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 468.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 466.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 448.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 447.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 444.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 443.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 442.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 440.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 440.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 440.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 431.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 431.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 429.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 421.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 420.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 418.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 416.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 415.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 409.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 409.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 408.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 407.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 403.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 401.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 400.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 400.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 400.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 396.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 388.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 387.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 387.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 384.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 382.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 376.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 371.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 371.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 370.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 369.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 369.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 368.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 368.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 367.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 364.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 363.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 362.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 361.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 360.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 360.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 357.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 357.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 354.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 351.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 350.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 349.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 349.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 348.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 347.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 345.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 344.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 342.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 341.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 339.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 337.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 331.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 329.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 328.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 328.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 328.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 327.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 325.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 324.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 323.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 323.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 318.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 317.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 316.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 313.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 311.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 310.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 307.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 304.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 303.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 301.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 300.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 295.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 291.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 289.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 289.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 288.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 282.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 280.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 279.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 276.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 276.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 275.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 275.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 272.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 268.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 268.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 266.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 266.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 264.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 263.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 257.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 256.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 255.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 254.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 254.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 252.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 249.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 249.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 248.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 247.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 244.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 242.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 242.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 241.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 239.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 238.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 237.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 236.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 236.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 236.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 236.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 236.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 233.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 233.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 233.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 233.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 229.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 229.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 228.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 225.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 222.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 220.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 219.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 218.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 218.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 217.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 217.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 211.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 207.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 207.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 207.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 206.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 202.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 202.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 195.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 195.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 192.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 191.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 191.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 191.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 188.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 188.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 184.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 183.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 182.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 181.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 180.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 175.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 174.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 173.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 173.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 172.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 167.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 164.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 164.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 164.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 163.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 163.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 163.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 159.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 158.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 156.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 156.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 153.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 152.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 151.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 149.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 148.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 148.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 146.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 145.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 141.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 137.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 133.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 132.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 131.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 131.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 130.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 129.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 128.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 123.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 121.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 116.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 115.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 114.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 114.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 105.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 102.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 101.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 101.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 100.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 100.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 99.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 97.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 95.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 95.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 94.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 94.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 92.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 90.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 87.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 86.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 84.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 84.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 83.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 80.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 78.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 75.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 74.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 70.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 69.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 63.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 60.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 59.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 55.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 53.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 53.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 51.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 50.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 44.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

180.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 180.5
Samples: 4

Max nTPM: 214.3
Min nTPM: 162.1
Sample A Female 214.3
Sample B Female 162.1
Sample C Male 179.3
Sample D Male 166.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 103.6
Samples: 4

Max nTPM: 109.5
Min nTPM: 96.0
Sample A Male 104.5
Sample B Male 109.5
Sample C Female 104.4
Sample D Female 96.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.9
68798085 Antisense, RP_050215_01_G03, Mouse strain C57BL/6J (56 days, male) 6.9

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