Tissue expression of BSCL2 - Staining in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	54.8	nTPM
GTEx:	54.8	nTPM
FANTOM5:	128.4	Scaled Tags Per Million

Pig:	49.4	nTPM
Mouse:	76.6	nTPM

RETINA - GTEx RNA-seqⁱ

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	54.8

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 54.8

Samples: 105

Max nTPM: 93.3
Min nTPM: 8.6
Std nTPM: 16.5
Median nTPM:

506_1	65 years, male	93.3
319_1	81 years, male	88.9
320_1	89 years, female	86.3
376_1	75 years, female	83.7
243_1	75 years, male	83.3
153_1	70 years, female	80.2
18_1	88 years, male	79.5
293_1	68 years, female	79.0
17_1	71 years, male	78.8
163_1	78 years, male	78.8
115_1	83 years, male	77.8
6_1	73 years, female	75.6
377_1	82 years, female	74.9
292_1	71 years, male	72.8
318_1	68 years, male	72.5
352_1	62 years, male	72.0
503_1	68 years, male	72.0
425_1	59 years, female	71.9
452_1	88 years, female	70.7
177_1	74 years, male	70.4
172_1	72 years, female	70.1
386_1	76 years, male	69.8
335_1	73 years, female	68.8
321_1	62 years, female	67.4
356_1	87 years, female	65.1
145_1	84 years, male	64.7
254_1	77 years, female	64.7
2_1	77 years, female	64.5
322_1	76 years, male	64.3
406_1	79 years, male	64.3
316_1	62 years, male	63.7
120_1	70 years, female	63.1
480_1	63 years, male	62.7
517_1	88 years, male	62.2
189_1	76 years, male	62.1
349_1	83 years, male	61.9
353_1	82 years, female	60.3
264_1	73 years, female	60.1
404_1	82 years, female	60.1
518_1	75 years, female	59.9
126_1	63 years, male	59.7
288_1	66 years, female	59.5
109_1	81 years, female	59.4
251_1	78 years, male	59.4
4_1	88 years, female	58.7
9_1	66 years, female	57.9
295_1	61 years, female	57.9
351_1	91 years, male	56.4
350_1	84 years, female	56.2
394_1	75 years, female	55.9
142_1	61 years, female	55.6
286_1	68 years, female	55.4
246_1	77 years, male	54.4
137_1	83 years, male	54.3
229_1	69 years, female	54.3
396_1	62 years, male	54.1
405_1	91 years, male	53.9
99_1	64 years, male	53.3
526_1	61 years, male	53.0
265_1	87 years, male	51.8
348_1	84 years, male	51.7
379_1	60 years, male	51.7
237_1	82 years, male	51.4
313_1	79 years, female	50.6
413_1	59 years, female	50.4
499_1	55 years, female	49.0
35_1	74 years, female	48.7
81_1	67 years, male	48.3
266_1	85 years, male	47.9
354_1	81 years, female	47.6
389_1	86 years, female	47.6
117_1	61 years, male	47.3
291_1	76 years, male	46.4
32_1	67 years, male	46.1
173_1	67 years, male	45.8
317_1	60 years, male	45.8
468_1	89 years, male	45.6
324_1	76 years, male	45.5
375_1	74 years, female	45.3
355_1	70 years, female	44.7
139_1	64 years, female	44.3
217_1	76 years, male	44.3
42_1	85 years, male	44.2
447_1	81 years, male	44.0
501_1	88 years, male	44.0
384_1	83 years, male	43.2
41_1	94 years, female	43.1
347_1	72 years, male	42.4
314_1	67 years, male	39.5
43_1	64 years, female	35.2
315_1	62 years, female	34.6
311_1	78 years, male	34.5
162_1	79 years, female	34.2
119_1	70 years, female	33.5
466_1	57 years, female	32.6
218_1	71 years, female	31.2
89_1	63 years, male	30.6
149_1	88 years, male	29.3
307_1	66 years, female	29.3
415_1	77 years, female	25.6
495_1	57 years, female	24.2
414_1	84 years, female	23.1
491_1	89 years, female	16.6
490_1	67 years, female	16.5
308_1	70 years, female	8.6
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RETINA - FANTOM5 CAGEⁱ

Max subtype Scaled Tags Per Millionⁱ Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.	128.4

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 128.4

FF:10030-101E3

24-65 years, mixed

128.4

RETINA - Pig RNA-seqⁱ

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	49.4

Pig sample

Sample description

nTPM

Retina
nTPM: 49.4

Samples: 4

Max nTPM: 54.5
Min nTPM: 45.4

Sample A	Female	46.2
Sample B	Female	54.5
Sample C	Male	51.4
Sample D	Male	45.4

RETINA - Mouse RNA-seqⁱ

Max subtype nTPMⁱ Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.	76.6

Mouse sample

Sample description

nTPM

Retina
nTPM: 76.6

Samples: 4

Max nTPM: 93.6
Min nTPM: 62.9

Sample A	Male	69.7
Sample B	Male	80.1
Sample C	Female	93.6
Sample D	Female	62.9