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RNF187
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  • SUMMARY

  • TISSUE

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  • RNF187
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:87.0 nTPM
HPA Brain:49.6 nTPM
GTEx:87.0 nTPM
Pig:55.4 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 49.3
1961 Female, age 42, unknown 49.8
2226 Male, age 75, left hemisphere 48.9
Dorsomedial nucleus
nTPM: 42.4
1989 Male, age 62, unknown 49.9
2041 Female, age 72, unknown 39.6
2017 Female, age 42, unknown 37.7
Lateral hypothalamic area
nTPM: 49.6
1791 Male, age 80, right hemisphere 56.5
2228 Male, age 66, unknown 55.6
2271 Male, age 75, both hemispheres 52.5
2412 Male, age 62, unknown 33.8
Mammillary body
nTPM: 40.9
1923 Female, age 72, unknown 58.4
1948 Female, age 72, unknown 39.4
1945 Male, age 80, right hemisphere 38.5
2413 Male, age 66, unknown 38.0
1834 Female, age 42, unknown 29.9
Paraventricular nucleus
nTPM: 31.0
2700 Male, age 62, unknown 31.0
Preoptic area
nTPM: 39.9
1907 Male, age 80, right hemisphere 47.9
1861 Female, age 42, unknown 40.9
2414 Female, age 72, unknown 31.0
Supraoptic nucleus
nTPM: 39.8
1894 Female, age 72, unknown 45.3
2835 Female, age 72, unknown 38.1
2043 Male, age 62, unknown 35.9
Ventromedial nucleus
nTPM: 43.9
1982 Female, age 72, unknown 53.3
1822 Female, age 42, unknown 34.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 87.0
Samples: 257

Max nTPM: 153.4
Min nTPM: 44.7
Std nTPM: 21.5
Median nTPM: 86.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 153.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 148.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 137.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 136.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 133.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 130.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 128.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 128.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 127.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 127.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 126.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 124.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 124.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 123.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 122.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 121.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 120.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 120.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 118.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 118.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 116.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 116.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 116.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 116.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 115.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 115.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 115.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 115.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 114.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 114.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 114.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 114.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 114.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 114.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 113.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 113.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 113.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 112.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 111.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 111.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 111.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 111.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 110.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 110.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 109.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 109.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 108.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 108.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 108.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 107.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 107.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 106.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 106.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 105.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 105.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 104.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 104.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 103.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 103.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 102.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 102.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 101.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 101.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 101.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 101.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 101.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 100.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 99.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 99.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 99.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 99.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 99.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 99.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 99.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 99.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 98.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 98.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 97.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 97.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 97.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 97.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 96.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 96.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 96.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 96.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 96.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 95.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 95.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 95.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 95.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 95.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 95.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 95.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 94.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 94.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 94.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 93.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 93.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 92.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 92.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 92.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 92.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 91.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 91.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 91.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 91.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 91.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 91.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 90.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 90.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 90.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 90.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 89.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 89.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 89.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 89.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 88.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 88.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 88.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 88.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 88.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 87.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 87.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 87.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 86.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 86.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 86.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 86.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 86.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 86.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 86.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 86.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 85.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 85.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 85.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 85.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 85.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 84.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 84.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 84.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 84.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 84.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 83.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 83.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 83.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 83.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 82.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 81.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 81.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 80.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 80.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 80.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 80.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 79.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 79.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 79.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 79.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 78.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 78.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 78.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 78.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 77.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 76.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 76.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 76.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 76.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 76.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 75.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 75.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 74.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 74.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 74.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 74.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 74.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 74.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 74.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 74.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 74.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 74.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 73.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 73.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 73.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 73.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 72.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 72.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 72.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 72.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 71.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 71.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 70.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 70.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 70.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 70.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 70.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 70.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 69.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 69.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 69.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 68.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 67.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 67.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 67.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 67.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 66.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 66.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 66.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 66.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 66.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 66.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 65.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 65.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 65.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 65.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 65.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 65.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 64.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 64.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 64.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 63.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 63.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 63.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 63.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 62.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 62.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 62.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 61.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 61.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 61.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 60.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 60.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 60.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 60.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 60.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 60.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 59.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 59.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 58.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 57.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 57.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 55.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 55.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 55.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 54.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 54.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 54.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 53.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 52.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 51.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 50.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 50.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 48.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 47.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 46.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 46.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 46.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 45.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 44.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 55.4
Samples: 4

Max nTPM: 71.3
Min nTPM: 47.7
Sample A Female 71.3
Sample B Female 53.1
Sample C Male 49.5
Sample D Male 47.7

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