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LDLRAD4
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  • LDLRAD4
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:56.3 nTPM
HPA Brain:112.0 nTPM
GTEx:56.3 nTPM
FANTOM5:80.5 Scaled Tags Per Million
Pig:8.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 103.4
2565 Male, age 75, midline 106.5
1981 Female, age 72, midline 105.8
2816 Male, age 47, midline 105.1
2048 Male, age 55, midline 102.2
2194 Female, age 79, both hemispheres 97.3
Cervical spinal cord, dorsal horn
nTPM: 100.1
2297 Male, age 75, both hemispheres 110.4
2721 Male, age 90, both hemispheres 104.8
1877 Male, age 55, unknown 100.2
2173 Female, age 72, unknown 98.4
2069 Male, age 47, both hemispheres 96.5
2296 Male, age 66, both hemispheres 90.1
Cervical spinal cord, ventral horn
nTPM: 112.0
2068 Male, age 55, unknown 124.0
2809 Male, age 90, both hemispheres 120.4
2295 Male, age 66, both hemispheres 120.3
2480 Male, age 75, both hemispheres 111.3
2820 Female, age 79, both hemispheres 107.8
2098 Female, age 72, unknown 88.3

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 56.3
Samples: 204

Max nTPM: 119.1
Min nTPM: 10.5
Std nTPM: 18.9
Median nTPM: 55.9
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 119.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 106.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 99.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 94.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 93.7
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 92.0
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 91.2
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 90.9
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 88.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 85.9
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 85.0
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 84.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 83.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 83.3
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 83.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 82.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 82.6
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 82.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 82.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 81.4
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 80.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 80.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 79.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 79.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 79.7
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 79.7
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 79.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 78.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 78.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 77.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 77.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 76.9
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 76.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 76.6
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 76.0
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 74.7
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 74.6
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 74.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 73.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 73.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 72.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 71.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 71.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 71.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 71.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 70.9
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 70.6
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 70.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 70.1
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 69.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 69.1
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 68.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 68.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 67.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 67.9
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 67.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 67.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 67.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 67.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 66.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 66.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 66.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 66.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 65.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 65.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 64.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 64.8
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 64.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 63.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 63.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 63.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 63.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 63.2
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 63.0
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 62.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 62.8
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 62.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 62.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 62.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 62.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 62.2
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 62.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 62.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 61.6
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 60.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 60.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 60.2
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 60.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 59.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 59.2
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 59.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 58.3
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 58.1
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 57.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 57.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 57.0
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 57.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 56.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 56.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 56.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 56.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 56.2
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 55.7
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 55.6
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 55.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 54.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 54.8
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 54.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 54.6
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 54.0
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 53.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 53.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 53.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 53.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 53.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 53.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 53.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 52.8
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 52.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 52.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 52.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 51.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 51.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 51.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 51.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 50.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 50.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 50.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 50.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 50.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 50.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 49.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 49.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 48.8
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 48.2
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 48.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 47.7
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 46.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 46.3
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 46.3
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 45.8
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 45.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 44.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 44.6
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 44.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 44.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 43.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 43.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 43.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 43.0
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 42.8
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 42.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 42.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 42.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 42.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 41.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 40.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 40.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 40.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 39.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 39.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 39.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 39.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 39.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 38.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 37.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 37.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 37.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 37.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 36.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 36.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 35.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 35.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 35.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 35.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 34.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 34.2
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 34.1
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 33.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 32.8
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 32.8
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 32.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 32.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 32.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 32.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 31.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 31.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 30.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 30.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 29.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 29.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 29.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 28.0
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 26.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 25.9
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 25.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 22.9
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 21.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 20.9
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 19.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 19.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 15.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 15.5
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 10.5
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

80.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 80.5
FF:10181-103D1 60 years, female 96.5
FF:10159-103A6 76 years, female 64.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.7
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 7.9
Samples: 4

Max nTPM: 9.6
Min nTPM: 5.6
Sample A Female 8.9
Sample B Female 7.4
Sample C Male 5.6
Sample D Male 9.6
Ventral spinal cord
nTPM: 8.7
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.9
Sample A Female 9.3
Sample B Female 9.1
Sample C Male 8.5
Sample D Male 7.9

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