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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
251.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 188.6
2411
Female, age 72, unknown
224.2
1833
Male, age 53, unknown
214.9
2828
Female, age 72, unknown
212.4
1830
Male, age 51, unknown
208.9
1870
Female, age 42, unknown
203.2
1827
Male, age 72, unknown
195.9
2019
Male, age 18, unknown
184.5
2666
Male, age 74, left hemisphere
168.1
2219
Male, age 76, both hemispheres
156.3
2586
Male, age 75, left hemisphere
118.0
Dorsal raphe nucleus nTPM: 199.3
2750
Male, age 76, both hemispheres
243.7
2016
Female, age 72, unknown
191.8
2047
Male, age 72, unknown
189.4
1828
Male, age 53, unknown
186.1
2298
Female, age 72, unknown
185.5
Inferior colliculus nTPM: 195.8
1848
Female, age 42, unknown
202.0
2849
Male, age 72, unknown
200.9
2097
Female, age 72, unknown
191.7
1890
Male, age 53, unknown
188.5
Median raphe nucleus nTPM: 251.4
2220
Male, age 76, midline
251.4
Periaquaductal grey, anterior nTPM: 176.8
1947
Male, age 18, unknown
198.4
1795
Male, age 51, unknown
167.0
2502
Female, age 75, unknown
165.2
Periaquaductal grey, dorsal nTPM: 214.3
2850
Male, age 76, both hemispheres
268.4
2464
Female, age 72, unknown
207.4
1831
Male, age 72, unknown
202.6
1840
Male, age 53, unknown
178.9
Periaquaductal grey, lateral nTPM: 209.6
2140
Male, age 76, both hemispheres
245.4
2053
Male, age 18, unknown
200.5
2272
Male, age 74, both hemispheres
183.0
Pretectal area nTPM: 195.9
2667
Female, age 75, unknown
247.1
2316
Male, age 76, right hemisphere
213.8
1815
Male, age 53, unknown
208.6
2273
Male, age 74, both hemispheres
198.3
2407
Male, age 75, both hemispheres
195.9
2825
Male, age 18, unknown
192.8
1817
Female, age 42, unknown
189.3
2224
Female, age 72, unknown
188.9
1944
Female, age 72, unknown
186.2
1816
Male, age 51, unknown
167.0
2007
Male, age 72, unknown
166.4
Red nucleus nTPM: 220.0
2823
Male, age 76, right hemisphere
262.7
1904
Male, age 53, unknown
244.4
1954
Female, age 42, unknown
237.9
1821
Female, age 72, unknown
235.0
1865
Male, age 51, unknown
230.4
2725
Female, age 75, unknown
228.7
2503
Female, age 72, unknown
225.9
2769
Male, age 72, unknown
213.5
2227
Male, age 72, unknown
213.1
2588
Male, age 74, left hemisphere
193.9
2785
Male, age 18, unknown
182.9
2584
Male, age 75, left hemisphere
171.2
Substantia nigra nTPM: 204.6
2409
Female, age 72, unknown
250.5
2699
Male, age 18, unknown
250.3
1851
Male, age 51, unknown
213.2
2241
Male, age 72, unknown
211.4
1916
Female, age 42, unknown
203.3
2590
Female, age 75, unknown
195.6
2583
Male, age 75, right hemisphere
193.9
1889
Female, age 72, unknown
190.7
1941
Male, age 53, unknown
188.5
2665
Male, age 74, both hemispheres
148.6
Superior colliculus nTPM: 184.6
1913
Female, age 42, unknown
225.9
1995
Male, age 72, unknown
217.2
1895
Male, age 76, right hemisphere
204.6
2087
Female, age 72, unknown
192.0
1839
Male, age 51, unknown
187.1
2587
Male, age 74, left hemisphere
186.8
1796
Male, age 53, unknown
177.6
2261
Male, age 18, unknown
165.3
2668
Female, age 75, unknown
151.9
2664
Male, age 75, both hemispheres
137.5
Ventral tegmental area nTPM: 200.4
2410
Female, age 72, unknown
229.5
2021
Male, age 53, unknown
208.3
2218
Male, age 76, both hemispheres
202.7
1915
Female, age 42, unknown
192.9
1942
Male, age 51, unknown
192.1
2223
Female, age 72, unknown
176.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
147.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 147.3
Samples: 183
Max nTPM: 339.4
Min nTPM: 67.3
Std nTPM: 42.8
Median nTPM: 140.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
339.4
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
329.8
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
283.1
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
261.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
257.1
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
248.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
222.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
221.4
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
221.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
216.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
215.5
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
213.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
211.6
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
207.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
206.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
206.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
203.8
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
201.6
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
200.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
200.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
200.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
197.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
196.3
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
195.1
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
194.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
192.7
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
190.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
188.5
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
186.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
186.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
185.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
183.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
183.1
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
181.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
179.5
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
179.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
178.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
177.2
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
175.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
174.7
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
173.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
172.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
169.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
168.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
168.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
168.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
168.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
167.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
167.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
164.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
163.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
162.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
162.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
162.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
162.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
161.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
160.2
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
160.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
159.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
159.8
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
159.7
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
159.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
158.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
157.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
155.6
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
155.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
155.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
155.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
155.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
154.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
153.9
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
153.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
152.1
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
150.5
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
149.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
148.8
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
147.5
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
146.6
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
145.6
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
144.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
144.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
144.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
144.0
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
144.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
143.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
142.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
142.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
141.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
141.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
141.5
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
141.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
140.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
140.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
140.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
139.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
139.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
137.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
136.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
135.2
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
134.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
134.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
134.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
133.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
133.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
132.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
132.2
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
131.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
130.9
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
129.9
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
128.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
127.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
126.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
126.4
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
126.3
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
125.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
124.9
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
124.9
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
124.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
124.7
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
124.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
124.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
123.5
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
123.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
122.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
121.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
121.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
121.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
120.8
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
120.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
120.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
120.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
119.9
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
119.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
119.1
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
119.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
119.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
118.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
117.5
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
117.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
117.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
116.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
116.7
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
116.7
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
115.6
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
115.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
114.8
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
114.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
113.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
113.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
112.5
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
111.6
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
110.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
110.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
110.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
109.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
108.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
107.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
107.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
107.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
107.5
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
106.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
106.7
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
105.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
105.2
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
105.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
104.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
103.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
103.0
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
101.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
99.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
97.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
97.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
96.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
92.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
91.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
88.9
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
88.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
87.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
83.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
81.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
76.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
71.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
67.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
175.2
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 175.3
Samples: 4
Max nTPM: 183.6
Min nTPM: 162.4
Sample A
Female
172.9
Sample B
Female
162.4
Sample C
Male
182.2
Sample D
Male
183.6
Midbrain nTPM: 171.9
Samples: 4
Max nTPM: 205.8
Min nTPM: 148.0
Sample A
Female
205.8
Sample B
Female
178.0
Sample C
Male
148.0
Sample D
Male
155.7
Periaqueductal gray nTPM: 148.5
Samples: 3
Max nTPM: 163.6
Min nTPM: 138.4
Sample B
Female
163.6
Sample C
Male
138.4
Sample D
Male
143.6
Superior colliculi nTPM: 162.3
Samples: 4
Max nTPM: 173.4
Min nTPM: 148.6
Sample A
Female
148.6
Sample B
Female
173.4
Sample C
Male
169.0
Sample D
Male
158.1
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
144.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 144.0
Samples: 4
Max nTPM: 153.7
Min nTPM: 137.4
Sample A
Male
137.4
Sample B
Male
140.6
Sample C
Female
153.7
Sample D
Female
144.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.