A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
865.2
nTPM
Monaco:
77.8
nTPM
Schmiedel:
437.6
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
865.2
HPA sample
nTPM
Classical monocyte nTPM: 865.2
Samples: 6
Max nTPM: 1905.5
Min nTPM: 384.8
P10809_1003
1905.5
P10809_1020
709.6
P10809_1039
1029.4
P10809_1058
384.8
P10809_1080
429.2
P10809_1107
732.7
Intermediate monocyte nTPM: 708.2
Samples: 6
Max nTPM: 1040.8
Min nTPM: 276.5
P10809_1004
707.6
P10809_1023
1040.8
P10809_1042
872.5
P10809_1061
276.5
P10809_1081
567.3
P10809_1108
784.7
Non-classical monocyte nTPM: 678.6
Samples: 5
Max nTPM: 822.4
Min nTPM: 452.2
P10809_1005
822.4
P10809_1053
723.6
P10809_1072
452.2
P10809_1082
613.3
P10809_1109
781.3
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
77.8
Monaco sample
nTPM
Classical monocyte nTPM: 77.8
Samples: 4
Max nTPM: 191.2
Min nTPM: 8.5
RHH5313_R3680
8.5
RHH5221_R3593
32.7
RHH5250_R3622
191.2
RHH5279_R3651
78.8
Intermediate monocyte nTPM: 46.3
Samples: 4
Max nTPM: 150.5
Min nTPM: 0.3
RHH5314_R3681
11.7
RHH5222_R3594
150.5
RHH5251_R3623
0.3
RHH5280_R3652
22.8
Non-classical monocyte nTPM: 46.2
Samples: 4
Max nTPM: 113.6
Min nTPM: 5.9
RHH5315_R3682
113.6
RHH5223_R3595
55.0
RHH5252_R3624
10.2
RHH5281_R3653
5.9
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
437.6
Schmiedel sample id
TPM
Classical monocyte TPM: 437.6
Samples: 91
Max TPM: 704.8
Min TPM: 223.1
MONOCYTES_1
704.8
MONOCYTES_2
684.6
MONOCYTES_3
665.5
MONOCYTES_4
635.4
MONOCYTES_5
612.7
MONOCYTES_6
611.4
MONOCYTES_7
597.9
MONOCYTES_8
594.2
MONOCYTES_9
594.0
MONOCYTES_10
584.3
MONOCYTES_11
582.4
MONOCYTES_12
581.3
MONOCYTES_13
553.5
MONOCYTES_14
552.2
MONOCYTES_15
550.5
MONOCYTES_16
536.8
MONOCYTES_17
535.8
MONOCYTES_18
534.2
MONOCYTES_19
532.8
MONOCYTES_20
531.5
MONOCYTES_21
531.1
MONOCYTES_22
530.0
MONOCYTES_23
529.6
MONOCYTES_24
529.4
MONOCYTES_25
521.8
MONOCYTES_26
515.9
MONOCYTES_27
509.0
MONOCYTES_28
508.1
MONOCYTES_29
505.3
MONOCYTES_30
505.2
MONOCYTES_31
504.5
MONOCYTES_32
503.5
MONOCYTES_33
500.3
MONOCYTES_34
499.8
MONOCYTES_35
485.6
MONOCYTES_36
482.9
MONOCYTES_37
482.7
MONOCYTES_38
475.2
MONOCYTES_39
469.4
MONOCYTES_40
468.7
MONOCYTES_41
466.6
MONOCYTES_42
465.4
MONOCYTES_43
460.8
MONOCYTES_44
454.8
MONOCYTES_45
453.5
MONOCYTES_46
451.2
MONOCYTES_47
436.1
MONOCYTES_48
428.3
MONOCYTES_49
419.8
MONOCYTES_50
411.5
MONOCYTES_51
409.2
MONOCYTES_52
409.1
MONOCYTES_53
400.0
MONOCYTES_54
394.1
MONOCYTES_55
390.2
MONOCYTES_56
387.4
MONOCYTES_57
384.5
MONOCYTES_58
380.6
MONOCYTES_59
380.1
MONOCYTES_60
375.5
MONOCYTES_61
371.0
MONOCYTES_62
369.7
MONOCYTES_63
361.9
MONOCYTES_64
361.5
MONOCYTES_65
358.5
MONOCYTES_66
354.9
MONOCYTES_67
353.8
MONOCYTES_68
350.0
MONOCYTES_69
347.8
MONOCYTES_70
343.7
MONOCYTES_71
342.7
MONOCYTES_72
338.7
MONOCYTES_73
338.3
MONOCYTES_74
337.7
MONOCYTES_75
333.0
MONOCYTES_76
331.8
MONOCYTES_77
329.5
MONOCYTES_78
329.3
MONOCYTES_79
310.1
MONOCYTES_80
304.5
MONOCYTES_81
292.0
MONOCYTES_82
283.2
MONOCYTES_83
273.1
MONOCYTES_84
269.0
MONOCYTES_85
253.4
MONOCYTES_86
239.4
MONOCYTES_87
236.0
MONOCYTES_88
235.2
MONOCYTES_89
227.4
MONOCYTES_90
227.0
MONOCYTES_91
223.1
Show allShow less
Non-classical monocyte TPM: 271.2
Samples: 90
Max TPM: 586.1
Min TPM: 72.0
M2_1
586.1
M2_2
450.3
M2_3
437.7
M2_4
428.3
M2_5
424.6
M2_6
419.9
M2_7
419.7
M2_8
411.0
M2_9
408.1
M2_10
397.5
M2_11
395.4
M2_12
393.9
M2_13
390.1
M2_14
383.5
M2_15
377.3
M2_16
376.9
M2_17
370.1
M2_18
369.7
M2_19
368.1
M2_20
367.1
M2_21
366.2
M2_22
356.6
M2_23
349.7
M2_24
343.9
M2_25
343.7
M2_26
343.6
M2_27
342.9
M2_28
328.6
M2_29
319.9
M2_30
319.1
M2_31
308.3
M2_32
305.9
M2_33
299.7
M2_34
297.1
M2_35
296.2
M2_36
291.6
M2_37
290.8
M2_38
289.2
M2_39
288.3
M2_40
285.0
M2_41
283.8
M2_42
283.1
M2_43
280.6
M2_44
279.1
M2_45
277.9
M2_46
277.2
M2_47
276.4
M2_48
268.6
M2_49
267.2
M2_50
265.3
M2_51
264.6
M2_52
264.2
M2_53
256.5
M2_54
254.8
M2_55
248.5
M2_56
240.5
M2_57
239.0
M2_58
224.1
M2_59
223.5
M2_60
221.0
M2_61
220.1
M2_62
219.6
M2_63
213.7
M2_64
207.6
M2_65
204.8
M2_66
200.6
M2_67
199.6
M2_68
199.1
M2_69
190.5
M2_70
178.9
M2_71
178.5
M2_72
175.7
M2_73
167.6
M2_74
165.0
M2_75
151.5
M2_76
151.5
M2_77
150.2
M2_78
150.0
M2_79
145.2
M2_80
134.8
M2_81
133.6
M2_82
129.2
M2_83
127.5
M2_84
116.0
M2_85
109.8
M2_86
107.7
M2_87
96.1
M2_88
93.5
M2_89
76.9
M2_90
72.0
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.