A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
658.5
nTPM
Monaco:
216.3
nTPM
Schmiedel:
54.1
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
658.5
HPA sample
nTPM
Classical monocyte nTPM: 658.5
Samples: 6
Max nTPM: 1110.0
Min nTPM: 444.9
P10809_1003
1110.0
P10809_1020
556.4
P10809_1039
635.0
P10809_1058
534.2
P10809_1080
444.9
P10809_1107
670.4
Intermediate monocyte nTPM: 571.6
Samples: 6
Max nTPM: 839.0
Min nTPM: 387.5
P10809_1004
562.5
P10809_1023
687.1
P10809_1042
519.1
P10809_1061
387.5
P10809_1081
434.3
P10809_1108
839.0
Non-classical monocyte nTPM: 556.1
Samples: 5
Max nTPM: 698.5
Min nTPM: 435.0
P10809_1005
667.6
P10809_1053
465.9
P10809_1072
513.3
P10809_1082
435.0
P10809_1109
698.5
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
216.3
Monaco sample
nTPM
Classical monocyte nTPM: 177.0
Samples: 4
Max nTPM: 209.6
Min nTPM: 145.7
RHH5313_R3680
184.8
RHH5221_R3593
145.7
RHH5250_R3622
167.7
RHH5279_R3651
209.6
Intermediate monocyte nTPM: 216.3
Samples: 4
Max nTPM: 244.8
Min nTPM: 164.9
RHH5314_R3681
240.7
RHH5222_R3594
214.9
RHH5251_R3623
244.8
RHH5280_R3652
164.9
Non-classical monocyte nTPM: 150.2
Samples: 4
Max nTPM: 177.5
Min nTPM: 118.6
RHH5315_R3682
177.5
RHH5223_R3595
139.0
RHH5252_R3624
165.6
RHH5281_R3653
118.6
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
54.1
Schmiedel sample id
TPM
Classical monocyte TPM: 54.1
Samples: 91
Max TPM: 70.5
Min TPM: 36.6
MONOCYTES_1
70.5
MONOCYTES_2
65.8
MONOCYTES_3
62.2
MONOCYTES_4
62.1
MONOCYTES_5
61.4
MONOCYTES_6
61.2
MONOCYTES_7
60.7
MONOCYTES_8
60.4
MONOCYTES_9
60.3
MONOCYTES_10
60.2
MONOCYTES_11
60.1
MONOCYTES_12
59.4
MONOCYTES_13
59.2
MONOCYTES_14
59.0
MONOCYTES_15
58.8
MONOCYTES_16
58.7
MONOCYTES_17
58.6
MONOCYTES_18
58.5
MONOCYTES_19
58.4
MONOCYTES_20
58.2
MONOCYTES_21
57.6
MONOCYTES_22
57.4
MONOCYTES_23
57.2
MONOCYTES_24
57.1
MONOCYTES_25
56.9
MONOCYTES_26
56.9
MONOCYTES_27
56.8
MONOCYTES_28
56.7
MONOCYTES_29
56.5
MONOCYTES_30
56.4
MONOCYTES_31
56.3
MONOCYTES_32
56.2
MONOCYTES_33
56.2
MONOCYTES_34
56.1
MONOCYTES_35
55.9
MONOCYTES_36
55.8
MONOCYTES_37
55.8
MONOCYTES_38
55.5
MONOCYTES_39
55.4
MONOCYTES_40
55.1
MONOCYTES_41
55.0
MONOCYTES_42
54.9
MONOCYTES_43
54.9
MONOCYTES_44
54.7
MONOCYTES_45
54.5
MONOCYTES_46
54.4
MONOCYTES_47
54.1
MONOCYTES_48
54.0
MONOCYTES_49
54.0
MONOCYTES_50
54.0
MONOCYTES_51
53.8
MONOCYTES_52
53.8
MONOCYTES_53
53.7
MONOCYTES_54
53.6
MONOCYTES_55
53.5
MONOCYTES_56
53.4
MONOCYTES_57
53.4
MONOCYTES_58
53.3
MONOCYTES_59
53.2
MONOCYTES_60
53.1
MONOCYTES_61
52.4
MONOCYTES_62
52.2
MONOCYTES_63
51.9
MONOCYTES_64
51.7
MONOCYTES_65
51.4
MONOCYTES_66
51.3
MONOCYTES_67
51.3
MONOCYTES_68
50.6
MONOCYTES_69
50.3
MONOCYTES_70
50.2
MONOCYTES_71
50.1
MONOCYTES_72
50.0
MONOCYTES_73
49.9
MONOCYTES_74
49.3
MONOCYTES_75
48.8
MONOCYTES_76
48.7
MONOCYTES_77
48.4
MONOCYTES_78
48.2
MONOCYTES_79
48.1
MONOCYTES_80
47.9
MONOCYTES_81
47.8
MONOCYTES_82
47.6
MONOCYTES_83
47.3
MONOCYTES_84
47.3
MONOCYTES_85
46.4
MONOCYTES_86
45.8
MONOCYTES_87
44.6
MONOCYTES_88
44.5
MONOCYTES_89
44.3
MONOCYTES_90
43.7
MONOCYTES_91
36.6
Show allShow less
Non-classical monocyte TPM: 50.3
Samples: 90
Max TPM: 63.5
Min TPM: 35.7
M2_1
63.5
M2_2
58.1
M2_3
57.9
M2_4
57.5
M2_5
57.4
M2_6
57.4
M2_7
57.2
M2_8
56.7
M2_9
56.4
M2_10
56.3
M2_11
56.3
M2_12
56.0
M2_13
55.9
M2_14
55.4
M2_15
55.3
M2_16
54.9
M2_17
54.9
M2_18
54.9
M2_19
54.6
M2_20
54.6
M2_21
54.3
M2_22
53.3
M2_23
53.2
M2_24
53.1
M2_25
53.0
M2_26
53.0
M2_27
52.9
M2_28
52.4
M2_29
52.2
M2_30
52.0
M2_31
52.0
M2_32
51.9
M2_33
51.9
M2_34
51.5
M2_35
51.5
M2_36
51.2
M2_37
51.1
M2_38
51.0
M2_39
50.7
M2_40
50.5
M2_41
50.5
M2_42
50.2
M2_43
50.0
M2_44
49.8
M2_45
49.6
M2_46
49.6
M2_47
49.5
M2_48
49.5
M2_49
49.3
M2_50
49.1
M2_51
48.9
M2_52
48.9
M2_53
48.7
M2_54
48.6
M2_55
48.4
M2_56
48.4
M2_57
48.3
M2_58
48.3
M2_59
48.3
M2_60
48.2
M2_61
48.2
M2_62
48.2
M2_63
48.0
M2_64
47.9
M2_65
47.5
M2_66
47.5
M2_67
47.4
M2_68
47.3
M2_69
46.8
M2_70
46.8
M2_71
46.8
M2_72
46.8
M2_73
46.6
M2_74
46.5
M2_75
46.2
M2_76
46.2
M2_77
46.1
M2_78
46.0
M2_79
45.8
M2_80
45.6
M2_81
45.4
M2_82
45.0
M2_83
44.9
M2_84
44.4
M2_85
44.3
M2_86
43.4
M2_87
43.4
M2_88
43.2
M2_89
43.0
M2_90
35.7
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
