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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2865.0 nTPM
HPA:2865.0 nTPM
GTEx:2461.9 nTPM
FANTOM5:32.9 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA056586
Ovarian stroma cells Medium



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2865.0
overview
Female, age 64
Ovary sample 192
nTPM: 1610
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 2690.6
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 2411.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 1994.6
N/A
Female, age 16
Ovary sample 3663
nTPM: 6807.4
N/A
Female, age 20
Ovary sample 3664
nTPM: 2829.5
N/A
Female, age 32
Ovary sample 3665
nTPM: 1711.3

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2461.9
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 2461.9
Samples: 193

Max nTPM: 5132.0
Min nTPM: 886.0
Std nTPM: 786.3
Median nTPM: 2353.9
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 5132.0
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 5104.2
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 5014.1
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 4465.7
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 4415.3
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 4360.5
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 4335.2
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 4288.4
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 4285.3
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 4159.3
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 4003.9
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 3921.3
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 3868.7
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 3731.4
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 3642.8
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 3621.6
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 3614.1
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 3609.1
GTEX-183WM-1926-SM-72D5F 70-79 years, female 3578.6
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 3571.0
GTEX-15EOM-1526-SM-68723 20-29 years, female 3558.2
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 3546.3
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 3505.7
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 3380.2
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 3283.0
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 3280.3
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 3256.1
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 3208.6
GTEX-QVJO-3126-SM-COH22 60-69 years, female 3196.1
GTEX-R45C-2526-SM-GRR28 60-69 years, female 3184.2
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 3177.7
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 3172.4
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 3170.5
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 3144.1
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 3103.7
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 3100.0
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 3046.0
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 3006.7
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 2988.1
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 2981.8
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 2928.4
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 2868.8
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 2856.6
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 2845.4
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 2818.8
GTEX-RU72-2226-SM-46MUE 50-59 years, female 2807.9
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 2806.0
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 2768.5
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 2764.3
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 2753.5
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 2750.0
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 2748.2
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 2733.8
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 2726.3
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 2716.8
GTEX-14BIN-1426-SM-664NI 50-59 years, female 2708.6
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 2706.4
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 2705.9
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 2703.6
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 2701.6
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 2675.4
GTEX-13SLX-2426-SM-664OM 50-59 years, female 2674.5
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 2673.5
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 2672.2
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 2667.6
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 2623.5
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 2611.6
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 2607.8
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 2585.9
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 2582.5
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 2552.3
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 2523.3
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 2512.8
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 2511.6
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 2510.6
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 2480.7
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 2476.1
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 2465.2
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 2453.5
GTEX-S341-0726-SM-4AD5R 40-49 years, female 2452.1
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 2450.4
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 2446.4
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 2444.6
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 2441.1
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 2437.9
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 2436.8
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 2420.2
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 2417.2
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 2399.0
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 2387.8
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 2383.7
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 2383.1
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 2381.7
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 2377.6
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 2366.9
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 2358.4
GTEX-14PKV-1226-SM-6871T 20-29 years, female 2353.9
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 2340.5
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 2340.2
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 2336.2
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 2331.7
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 2325.9
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 2321.3
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 2291.8
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 2289.9
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 2287.8
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 2282.7
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 2282.0
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 2279.6
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 2269.1
GTEX-11I78-1926-SM-59878 50-59 years, female 2258.4
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 2249.2
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 2242.9
GTEX-QCQG-1426-SM-48U22 50-59 years, female 2240.5
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 2235.2
GTEX-145ME-1226-SM-5MR87 40-49 years, female 2220.9
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 2214.0
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 2202.1
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 2200.0
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 2196.6
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 2176.9
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 2171.8
GTEX-18D9A-0826-SM-718C1 30-39 years, female 2141.6
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 2136.2
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 2134.2
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 2130.4
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 2126.7
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 2117.0
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 2108.3
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 2064.9
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 2058.7
GTEX-S32W-1226-SM-4AD67 50-59 years, female 2057.1
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 2043.3
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 2042.1
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 2021.6
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 2013.9
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 2010.0
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 2003.3
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 1996.9
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 1984.7
GTEX-14JG6-0626-SM-68716 30-39 years, female 1978.5
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 1977.2
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 1968.3
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 1949.4
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 1942.7
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 1932.2
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 1918.8
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 1909.0
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 1894.8
GTEX-P78B-1926-SM-3P616 40-49 years, female 1890.3
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 1890.0
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 1880.1
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 1878.6
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 1866.1
GTEX-Q734-0726-SM-48TZP 40-49 years, female 1858.6
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 1817.5
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 1816.0
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 1814.7
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 1794.0
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 1778.0
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 1773.6
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 1759.3
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 1758.2
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 1741.9
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 1714.6
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 1697.8
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 1694.8
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 1694.8
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 1679.5
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 1660.3
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 1659.8
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 1643.3
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 1629.8
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 1629.5
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 1617.6
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1567.9
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 1567.6
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 1482.3
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 1480.1
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 1474.2
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 1472.8
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 1459.2
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 1387.3
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 1381.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1301.9
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 1281.8
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1235.3
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 1215.8
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 1211.7
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1122.8
GTEX-R55G-1526-SM-48FER 40-49 years, female 1079.8
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1019.8
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 886.0
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

32.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 32.9
FF:10020-101D2 47,75,84 years, female 32.9

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