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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1142.1 nTPM
HPA:1142.1 nTPM
GTEx:1018.5 nTPM
FANTOM5:32.3 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA056586
Glandular cells High



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1142.1
overview
Female, age 68
Salivary gland sample 216
nTPM: 1202.7
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1075.3
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1148.3
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1018.5
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1018.5
Samples: 181

Max nTPM: 2939.4
Min nTPM: 662.3
Std nTPM: 242.2
Median nTPM: 987.2
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 2939.4
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 1766.4
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 1738.1
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 1691.3
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 1581.2
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 1536.8
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 1527.9
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 1430.9
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 1366.1
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 1323.7
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 1313.2
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 1296.7
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 1295.1
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 1279.8
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 1279.4
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 1269.1
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 1267.7
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 1250.7
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 1240.1
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 1239.3
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 1235.9
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 1224.3
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 1211.6
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 1211.1
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 1198.2
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 1193.7
GTEX-146FR-1226-SM-5MR78 60-69 years, female 1192.4
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 1189.7
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 1189.4
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 1182.8
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 1179.5
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 1178.5
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 1178.0
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 1175.1
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 1171.7
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 1166.0
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 1162.2
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 1159.3
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 1146.8
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1141.9
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 1141.8
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 1136.2
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 1130.1
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 1127.7
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 1125.5
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 1124.0
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 1122.3
GTEX-15SHV-2226-SM-6M464 60-69 years, male 1111.0
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 1102.4
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 1102.3
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 1098.2
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1098.2
GTEX-1445S-2926-SM-5O993 60-69 years, male 1092.5
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1089.2
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 1081.7
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 1069.5
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 1063.9
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 1058.9
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1058.3
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1051.7
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 1051.6
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1050.7
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 1048.6
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 1048.6
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1048.4
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1045.6
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1045.2
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1043.1
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 1041.3
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 1039.6
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 1033.1
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1028.1
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1027.5
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1025.9
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 1025.0
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 1024.3
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1023.2
GTEX-11P82-0926-SM-5986X 20-29 years, male 1020.5
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 1017.2
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1017.1
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1013.8
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1013.0
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 1007.4
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 1001.6
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 1000.5
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 996.7
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 995.7
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 990.7
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 990.0
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 987.3
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 987.2
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 983.2
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 974.2
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 969.6
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 969.4
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 966.8
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 964.7
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 957.7
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 957.1
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 954.4
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 949.0
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 946.7
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 946.6
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 945.6
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 944.6
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 943.2
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 940.2
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 940.0
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 931.7
GTEX-13113-1526-SM-5EGHV 60-69 years, female 928.3
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 924.5
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 923.7
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 919.8
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 919.8
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 919.5
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 918.5
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 912.9
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 911.4
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 909.9
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 908.4
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 907.9
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 906.0
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 900.5
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 898.0
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 896.5
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 895.5
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 892.9
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 891.1
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 889.8
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 888.7
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 886.3
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 878.9
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 874.1
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 873.0
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 870.7
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 869.5
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 867.6
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 863.5
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 861.2
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 859.8
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 859.7
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 856.6
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 854.9
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 853.9
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 848.0
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 847.4
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 847.1
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 843.4
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 840.4
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 831.3
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 830.9
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 825.1
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 822.9
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 820.9
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 819.0
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 813.1
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 811.0
GTEX-13O21-1926-SM-5MR39 50-59 years, male 810.6
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 806.9
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 801.5
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 799.7
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 798.3
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 793.2
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 792.1
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 790.1
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 783.1
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 779.7
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 778.4
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 768.1
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 754.3
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 752.9
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 752.9
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 752.8
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 734.3
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 731.3
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 726.1
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 707.6
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 707.3
GTEX-178AV-1426-SM-6LLID 40-49 years, male 698.7
GTEX-1B932-0626-SM-731EM 40-49 years, female 694.3
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 662.3
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

32.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 32.3
FF:10199-103F1 23 years, male 32.3
Salivary gland
Scaled Tags Per Million: 31.8
FF:10093-102C3 16-60 years, mixed 31.8
Submaxillary gland
Scaled Tags Per Million: 26.3
FF:10202-103F4 24 years, male 26.3

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