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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • BSG
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:426.3 nTPM
GTEx:621.3 nTPM
FANTOM5:372.7 Scaled Tags Per Million
Pig:41.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

426.3
Sample id Sample description nTPM
Putamen
nTPM: 426.3
2482 Female, age 94, left hemisphere 556.7
2466 Female, age 79, unknown 466.6
2489 Female, age 72, unknown 443.1
1829 Male, age 74, unknown 384.4
1838 Male, age 80, right hemisphere 379.4
2647 Male, age 75, left hemisphere 377.5
1937 Female, age 91, right hemisphere 376.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

621.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 621.3
Samples: 254

Max nTPM: 2871.7
Min nTPM: 242.6
Std nTPM: 284.5
Median nTPM: 549.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 2871.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2012.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1808.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1764.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1386.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1314.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1256.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1216.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1185.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1137.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1121.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1089.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1074.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1074.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1064.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1028.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1027.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1018.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1016.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1000.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 998.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 988.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 980.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 976.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 974.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 966.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 953.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 925.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 917.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 917.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 900.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 900.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 885.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 848.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 840.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 838.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 838.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 835.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 831.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 828.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 820.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 819.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 807.9
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 800.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 797.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 790.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 758.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 744.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 736.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 731.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 726.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 725.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 724.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 720.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 716.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 714.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 702.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 699.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 695.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 686.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 685.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 679.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 676.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 675.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 675.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 675.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 674.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 671.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 670.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 670.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 668.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 665.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 664.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 663.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 660.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 659.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 652.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 644.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 642.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 637.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 637.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 636.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 636.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 634.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 634.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 634.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 631.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 628.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 626.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 625.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 624.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 623.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 621.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 621.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 619.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 615.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 614.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 613.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 604.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 598.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 597.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 594.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 592.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 587.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 583.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 581.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 581.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 577.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 577.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 575.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 573.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 572.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 568.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 567.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 563.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 562.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 561.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 560.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 558.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 557.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 557.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 556.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 556.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 556.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 555.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 554.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 551.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 548.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 547.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 547.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 545.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 545.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 544.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 544.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 543.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 543.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 542.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 541.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 538.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 538.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 537.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 532.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 529.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 529.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 526.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 525.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 523.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 523.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 522.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 522.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 520.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 519.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 519.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 517.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 516.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 516.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 513.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 513.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 503.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 502.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 502.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 501.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 500.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 500.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 498.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 498.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 497.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 492.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 490.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 488.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 488.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 485.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 483.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 483.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 481.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 481.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 480.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 478.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 478.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 478.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 478.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 478.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 476.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 476.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 471.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 467.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 466.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 466.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 464.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 463.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 463.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 462.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 461.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 460.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 452.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 450.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 449.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 447.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 446.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 444.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 444.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 443.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 443.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 441.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 440.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 439.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 437.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 436.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 436.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 435.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 434.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 434.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 434.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 433.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 432.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 422.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 420.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 414.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 409.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 408.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 405.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 399.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 398.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 396.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 395.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 388.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 383.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 382.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 382.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 380.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 379.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 379.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 369.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 368.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 367.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 360.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 358.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 354.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 348.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 347.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 344.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 343.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 337.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 335.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 333.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 333.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 333.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 330.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 318.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 305.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 296.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 276.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 255.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 242.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

372.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 372.7
FF:10176-103C5 60 years, female 372.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.6
Pig sample Sample description nTPM
Putamen
nTPM: 41.6
Samples: 3

Max nTPM: 49.0
Min nTPM: 32.4
Sample B Female 32.4
Sample C Male 49.0
Sample D Male 43.5

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