We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TCEAL1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • TCEAL1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:51.6 nTPM
HPA Brain:36.8 nTPM
GTEx:51.6 nTPM
Pig:40.0 nTPM
Mouse:40.8 nTPM
Allen mouse:6.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 36.8
2226 Male, age 75, left hemisphere 43.9
1961 Female, age 42, unknown 29.8
Dorsomedial nucleus
nTPM: 24.8
2041 Female, age 72, unknown 28.3
1989 Male, age 62, unknown 24.6
2017 Female, age 42, unknown 21.4
Lateral hypothalamic area
nTPM: 28.8
1791 Male, age 80, right hemisphere 32.9
2228 Male, age 66, unknown 32.3
2271 Male, age 75, both hemispheres 27.6
2412 Male, age 62, unknown 22.3
Mammillary body
nTPM: 22.0
1923 Female, age 72, unknown 28.9
1948 Female, age 72, unknown 22.5
2413 Male, age 66, unknown 21.3
1945 Male, age 80, right hemisphere 19.6
1834 Female, age 42, unknown 17.9
Paraventricular nucleus
nTPM: 26.6
2700 Male, age 62, unknown 26.6
Preoptic area
nTPM: 27.5
1907 Male, age 80, right hemisphere 35.1
2414 Female, age 72, unknown 26.1
1861 Female, age 42, unknown 21.1
Supraoptic nucleus
nTPM: 23.7
1894 Female, age 72, unknown 28.2
2043 Male, age 62, unknown 22.0
2835 Female, age 72, unknown 20.9
Ventromedial nucleus
nTPM: 31.7
1982 Female, age 72, unknown 33.3
1822 Female, age 42, unknown 30.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 51.6
Samples: 257

Max nTPM: 101.4
Min nTPM: 20.5
Std nTPM: 14.1
Median nTPM: 51.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 101.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 101.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 90.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 87.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 82.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 80.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 79.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 78.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 78.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 76.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 74.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 74.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 74.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 73.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 73.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 72.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 72.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 71.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 71.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 70.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 70.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 70.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 70.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 69.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 68.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 68.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 68.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 67.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 67.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 67.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 67.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 67.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 67.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 66.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 66.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 66.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 65.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 65.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 65.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 65.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 65.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 64.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 64.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 64.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 64.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 64.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 63.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 63.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 62.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 62.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 62.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 62.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 62.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 62.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 62.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 62.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 61.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 61.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 61.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 61.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 61.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 61.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 60.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 60.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 60.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 60.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 60.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 59.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 59.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 59.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 59.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 59.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 59.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 59.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 59.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 59.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 59.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 58.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 58.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 58.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 58.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 58.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 58.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 58.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 57.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 57.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 57.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 57.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 57.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 57.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 57.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 56.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 56.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 56.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 56.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 55.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 55.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 55.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 55.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 54.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 54.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 54.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 54.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 54.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 54.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 54.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 54.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 54.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 53.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 53.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 53.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 53.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 53.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 53.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 53.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 53.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 53.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 52.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 52.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 52.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 52.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 52.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 52.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 52.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 52.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 52.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 52.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 51.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 51.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 51.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 51.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 51.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 51.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 51.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 51.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 51.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 50.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 50.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 50.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 50.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 50.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 50.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 50.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 49.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 49.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 49.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 49.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 49.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 49.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 49.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 49.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 48.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 48.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 48.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 48.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 48.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 48.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 48.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 48.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 48.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 47.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 47.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 47.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 47.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 47.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 47.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 47.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 47.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 47.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 46.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 46.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 46.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 46.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 45.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 45.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 45.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 44.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 44.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 44.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 43.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 43.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 43.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 43.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 43.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 43.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 43.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 43.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 42.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 42.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 42.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 42.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 42.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 42.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 41.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 41.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 41.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 41.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 40.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 40.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 40.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 40.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 39.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 39.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 39.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 39.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 39.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 39.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 38.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 38.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 38.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 38.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 38.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 37.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 37.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 37.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 37.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 37.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 36.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 36.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 36.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 36.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 35.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 35.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 35.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 35.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 35.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 34.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 33.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 33.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 33.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 33.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 33.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 32.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 32.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 32.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 31.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 30.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 30.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 29.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 29.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 28.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 28.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 28.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 27.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 27.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 27.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 26.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 26.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 26.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 26.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 25.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 25.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 24.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 23.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 22.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 21.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 20.5
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 40.0
Samples: 4

Max nTPM: 51.7
Min nTPM: 31.3
Sample A Female 51.7
Sample B Female 38.5
Sample C Male 31.3
Sample D Male 38.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 40.8
Samples: 4

Max nTPM: 45.5
Min nTPM: 34.6
Sample A Male 40.4
Sample B Male 45.5
Sample C Female 42.7
Sample D Female 34.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.7
68193054 Antisense, RP_040826_01_E12, Mouse strain C57BL/6J (56 days, male) 6.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo