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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • EVOLUTION

  • CFL1
EVOLUTIONARY AMYGDALA Show tissue menu
BRAIN28 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM10 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE12 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CORPUS CALLOSUM DORSAL ROOT GANGLION ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
MOTOR AND PREFRONTAL CORTEX OCCIPITAL CORTEX OLFACTORY BULB PONS RETROSPLENIAL AND CINGULATE CORTEX SEPTAL AREA SEPTUM SOMATOSENSORY CORTEX SPINAL CORD THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES PERICARDIUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:798.6 nTPM
HPA Brain:502.9 nTPM
GTEx:798.6 nTPM
FANTOM5:679.3 Scaled Tags Per Million
Mouse:942.3 nTPM
Rat:0.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

502.9
Sample id Sample description nTPM
Basal amygdala
nTPM: 486.0
2110 Male, age 80, left hemisphere 554.7
2243 Female, age 91, right hemisphere 547.3
1955 Male, age 76, both hemispheres 498.3
2685 Female, age 94, left hemisphere 472.4
2609 Male, age 75, right hemisphere 462.0
2827 Female, age 67, right hemisphere 381.3
Central amygdala
nTPM: 502.9
2826 Female, age 94, left hemisphere 589.7
1905 Male, age 76, both hemispheres 551.0
2239 Male, age 80, left hemisphere 520.8
2515 Male, age 75, right hemisphere 454.5
2701 Female, age 91, right hemisphere 398.5
Corticomedial amygdala
nTPM: 485.3
2829 Male, age 80, left hemisphere 544.4
2242 Female, age 91, right hemisphere 530.8
2240 Male, age 76, both hemispheres 489.2
2428 Male, age 75, right hemisphere 471.1
2429 Female, age 94, left hemisphere 467.9
2535 Female, age 67, right hemisphere 408.4
Lateral amygdala
nTPM: 481.1
2534 Female, age 94, left hemisphere 596.6
1883 Male, age 76, both hemispheres 584.4
2516 Male, age 75, right hemisphere 450.0
2256 Male, age 80, left hemisphere 448.8
2255 Female, age 91, right hemisphere 413.5
2830 Female, age 67, right hemisphere 393.4

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

798.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 798.6
Samples: 181

Max nTPM: 1864.3
Min nTPM: 462.4
Std nTPM: 217.0
Median nTPM: 751.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1864.3
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 1541.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1445.6
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1411.7
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 1346.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1309.8
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 1236.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 1236.4
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 1234.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1204.5
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1194.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1193.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1189.5
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1154.0
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1108.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1102.2
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 1087.9
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 1082.3
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1076.6
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1072.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 1070.3
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 1069.0
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 1049.6
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1016.9
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 1008.7
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1006.4
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 990.0
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 985.4
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 980.1
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 979.5
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 972.8
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 964.7
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 962.9
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 961.7
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 961.7
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 951.7
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 930.7
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 930.0
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 926.3
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 926.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 911.2
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 910.0
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 907.6
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 904.4
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 902.3
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 899.5
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 894.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 894.3
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 889.3
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 877.8
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 875.7
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 869.1
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 868.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 867.9
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 862.5
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 861.6
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 847.9
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 847.6
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 842.0
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 840.8
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 839.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 839.5
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 839.4
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 830.1
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 826.3
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 823.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 816.8
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 816.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 813.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 811.7
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 810.4
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 807.8
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 806.9
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 806.5
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 799.8
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 797.3
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 791.0
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 779.9
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 778.9
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 778.5
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 775.8
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 772.9
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 771.6
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 771.3
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 770.7
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 767.0
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 766.6
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 759.3
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 756.8
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 753.5
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 751.7
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 749.2
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 746.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 745.0
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 744.7
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 743.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 740.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 739.6
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 738.2
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 738.0
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 737.1
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 737.0
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 733.3
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 732.8
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 732.7
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 728.7
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 727.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 721.2
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 719.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 719.1
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 715.5
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 714.4
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 708.0
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 703.5
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 699.9
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 699.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 699.5
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 697.2
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 695.9
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 687.7
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 683.9
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 683.0
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 674.0
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 673.2
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 671.6
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 668.7
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 665.8
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 665.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 663.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 661.5
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 658.4
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 658.3
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 656.1
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 655.4
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 652.6
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 649.3
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 644.2
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 635.9
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 635.4
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 634.2
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 633.7
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 630.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 623.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 620.7
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 620.4
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 620.3
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 620.3
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 619.5
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 616.6
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 616.1
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 613.9
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 613.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 610.5
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 610.5
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 604.7
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 597.8
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 595.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 593.8
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 590.6
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 576.4
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 576.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 576.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 571.9
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 566.4
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 563.8
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 562.6
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 557.1
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 554.7
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 554.3
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 543.8
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 542.8
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 538.7
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 536.9
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 522.8
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 520.2
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 516.4
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 504.9
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 488.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 466.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 465.7
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 462.4
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

679.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 679.3
FF:10151-102I7 76 years, female 679.3

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

942.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 942.3
Samples: 4

Max nTPM: 968.9
Min nTPM: 896.3
Sample A 941.8
Sample B 896.3
Sample C 962.3
Sample D 968.9

AMYGDALA - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Rat sample Sample description nTPM
Amygdala
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A 0.1
Sample A 0.0
Sample A 0.0
Sample A 0.0

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