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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • CNP
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:592.7 nTPM
GTEx:397.2 nTPM
FANTOM5:262.0 Scaled Tags Per Million
Macaque:274.5 nTPM
Pig:407.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

592.7
Sample id Sample description nTPM
Putamen
nTPM: 592.7
1829 Male, age 74, unknown 766.3
2647 Male, age 75, left hemisphere 761.2
2482 Female, age 94, left hemisphere 754.9
2489 Female, age 72, unknown 612.9
1937 Female, age 91, right hemisphere 540.2
2466 Female, age 79, unknown 485.4
1838 Male, age 80, right hemisphere 228.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

397.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 397.2
Samples: 254

Max nTPM: 1496.0
Min nTPM: 94.1
Std nTPM: 177.2
Median nTPM: 370.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1496.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 964.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 905.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 901.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 822.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 822.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 799.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 797.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 796.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 763.9
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 755.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 741.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 699.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 698.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 688.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 679.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 677.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 669.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 659.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 651.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 642.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 639.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 639.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 622.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 621.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 620.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 618.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 615.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 613.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 606.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 601.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 580.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 569.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 568.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 564.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 563.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 562.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 553.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 553.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 551.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 549.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 543.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 541.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 541.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 536.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 535.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 529.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 527.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 527.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 523.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 522.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 521.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 521.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 519.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 516.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 515.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 513.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 512.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 511.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 509.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 508.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 508.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 499.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 497.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 494.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 493.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 492.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 492.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 491.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 487.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 481.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 480.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 477.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 474.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 473.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 468.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 467.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 465.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 464.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 461.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 460.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 458.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 457.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 454.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 454.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 451.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 451.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 448.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 443.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 442.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 435.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 432.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 428.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 426.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 426.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 425.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 421.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 418.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 413.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 413.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 411.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 409.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 408.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 405.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 403.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 401.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 399.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 398.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 396.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 396.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 394.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 394.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 394.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 389.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 388.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 386.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 385.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 385.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 385.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 385.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 383.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 381.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 377.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 373.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 371.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 370.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 370.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 369.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 369.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 368.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 366.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 363.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 362.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 362.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 361.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 361.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 359.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 357.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 355.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 354.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 353.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 350.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 348.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 345.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 343.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 343.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 340.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 332.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 331.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 331.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 327.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 326.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 324.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 323.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 322.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 317.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 317.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 313.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 312.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 311.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 308.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 305.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 302.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 300.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 300.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 299.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 296.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 295.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 293.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 293.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 293.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 290.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 289.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 288.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 282.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 281.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 279.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 278.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 277.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 274.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 274.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 271.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 271.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 269.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 268.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 268.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 268.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 267.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 267.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 266.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 265.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 264.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 264.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 261.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 255.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 255.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 254.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 254.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 254.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 252.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 251.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 250.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 244.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 243.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 240.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 237.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 235.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 234.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 234.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 234.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 231.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 230.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 229.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 228.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 227.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 223.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 223.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 223.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 219.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 219.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 219.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 217.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 215.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 210.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 210.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 210.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 210.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 207.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 204.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 201.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 201.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 201.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 200.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 199.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 199.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 198.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 198.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 196.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 195.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 194.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 192.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 192.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 191.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 185.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 184.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 178.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 174.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 172.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 162.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 149.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 146.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 144.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 134.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 94.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

262.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 262.0
FF:10176-103C5 60 years, female 262.0

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

274.5
Macaque sample Sample description nTPM
Putamen
nTPM: 274.5
Samples: 2

Max nTPM: 284.1
Min nTPM: 264.9
Sample A 264.9
Sample B 284.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

407.3
Pig sample Sample description nTPM
Putamen
nTPM: 407.3
Samples: 3

Max nTPM: 633.4
Min nTPM: 247.8
Sample B Female 247.8
Sample C Male 340.7
Sample D Male 633.4

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