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  • SUMMARY

  • TISSUE

  • BRAIN

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  • RPL4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:346.1 nTPM
HPA Brain:179.9 nTPM
GTEx:346.1 nTPM
Pig:302.8 nTPM
Mouse:694.3 nTPM
Allen mouse:15.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

179.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 109.4
2226 Male, age 75, left hemisphere 118.6
1961 Female, age 42, unknown 100.3
Dorsomedial nucleus
nTPM: 62.5
2017 Female, age 42, unknown 68.0
2041 Female, age 72, unknown 60.5
1989 Male, age 62, unknown 58.9
Lateral hypothalamic area
nTPM: 179.9
2228 Male, age 66, unknown 195.8
2412 Male, age 62, unknown 179.8
1791 Male, age 80, right hemisphere 173.6
2271 Male, age 75, both hemispheres 170.4
Mammillary body
nTPM: 154.7
1948 Female, age 72, unknown 187.9
1945 Male, age 80, right hemisphere 177.7
2413 Male, age 66, unknown 149.8
1923 Female, age 72, unknown 133.0
1834 Female, age 42, unknown 125.2
Paraventricular nucleus
nTPM: 113.5
2700 Male, age 62, unknown 113.5
Preoptic area
nTPM: 129.0
2414 Female, age 72, unknown 146.9
1861 Female, age 42, unknown 125.6
1907 Male, age 80, right hemisphere 114.5
Supraoptic nucleus
nTPM: 136.1
1894 Female, age 72, unknown 165.5
2835 Female, age 72, unknown 134.8
2043 Male, age 62, unknown 108.2
Ventromedial nucleus
nTPM: 89.3
1822 Female, age 42, unknown 120.1
1982 Female, age 72, unknown 58.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

346.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 346.1
Samples: 257

Max nTPM: 1395.7
Min nTPM: 166.6
Std nTPM: 143.9
Median nTPM: 311.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1395.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 912.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 885.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 849.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 831.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 790.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 779.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 729.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 721.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 680.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 664.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 655.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 638.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 637.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 627.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 611.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 576.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 566.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 565.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 555.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 533.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 526.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 509.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 507.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 505.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 500.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 494.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 481.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 475.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 469.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 461.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 458.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 454.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 453.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 452.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 445.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 444.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 444.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 443.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 436.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 436.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 429.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 429.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 425.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 425.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 416.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 410.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 408.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 406.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 405.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 404.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 404.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 401.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 399.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 397.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 396.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 395.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 394.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 393.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 393.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 392.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 392.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 390.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 388.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 382.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 375.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 374.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 374.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 371.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 371.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 370.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 370.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 369.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 368.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 364.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 361.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 360.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 359.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 357.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 357.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 353.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 352.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 351.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 351.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 349.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 348.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 347.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 347.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 346.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 345.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 344.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 344.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 343.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 343.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 340.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 338.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 337.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 337.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 337.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 337.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 335.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 335.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 334.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 333.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 333.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 332.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 331.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 328.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 328.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 327.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 327.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 325.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 322.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 321.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 321.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 319.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 319.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 318.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 317.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 316.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 316.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 315.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 314.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 314.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 313.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 313.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 311.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 311.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 311.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 311.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 308.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 306.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 305.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 305.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 305.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 304.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 304.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 303.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 303.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 302.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 299.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 297.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 297.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 296.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 296.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 296.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 295.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 294.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 293.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 293.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 292.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 291.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 291.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 290.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 290.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 290.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 289.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 288.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 287.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 286.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 284.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 284.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 284.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 283.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 283.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 283.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 281.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 281.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 280.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 280.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 280.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 279.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 279.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 277.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 277.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 276.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 275.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 273.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 273.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 272.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 272.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 271.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 270.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 269.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 267.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 266.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 266.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 266.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 265.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 265.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 264.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 263.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 263.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 260.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 260.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 258.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 255.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 254.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 254.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 254.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 253.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 251.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 251.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 250.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 250.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 248.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 248.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 247.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 245.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 245.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 244.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 243.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 242.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 242.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 241.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 241.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 240.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 240.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 239.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 239.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 237.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 236.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 235.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 234.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 233.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 231.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 230.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 228.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 227.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 227.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 226.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 225.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 224.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 221.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 219.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 218.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 217.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 216.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 216.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 215.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 214.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 213.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 212.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 210.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 210.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 209.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 207.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 207.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 198.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 198.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 197.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 196.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 195.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 189.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 184.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 176.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 166.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

302.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 302.8
Samples: 4

Max nTPM: 420.6
Min nTPM: 215.8
Sample A Female 420.6
Sample B Female 289.6
Sample C Male 285.2
Sample D Male 215.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

694.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 694.4
Samples: 4

Max nTPM: 742.9
Min nTPM: 659.3
Sample A Male 678.4
Sample B Male 742.9
Sample C Female 696.8
Sample D Female 659.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 15.1
69095958 Antisense, RP_050324_02_E07, Mouse strain C57BL/6J (56 days, male) 15.1

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