A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
478.7
nTPM
Monaco:
364.2
nTPM
Schmiedel:
380.5
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
478.7
HPA sample
nTPM
NK-cell nTPM: 478.7
Samples: 6
Max nTPM: 547.6
Min nTPM: 284.4
P10809_1013
511.0
P10809_1033
546.8
P10809_1052
467.0
P10809_1071
547.6
P10809_1093
284.4
P10809_1103
515.6
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
364.2
Monaco sample
nTPM
NK-cell nTPM: 364.2
Samples: 4
Max nTPM: 468.7
Min nTPM: 198.5
RHH5316_R3683
366.7
RHH5224_R3596
468.7
RHH5253_R3625
198.5
RHH5282_R3654
422.8
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
380.5
Schmiedel sample id
TPM
NK-cell TPM: 380.5
Samples: 90
Max TPM: 501.8
Min TPM: 301.4
NK_1
501.8
NK_2
477.5
NK_3
472.9
NK_4
464.2
NK_5
459.8
NK_6
452.2
NK_7
447.5
NK_8
440.3
NK_9
439.8
NK_10
436.2
NK_11
432.1
NK_12
427.2
NK_13
425.6
NK_14
422.6
NK_15
421.8
NK_16
420.9
NK_17
418.9
NK_18
416.7
NK_19
414.0
NK_20
411.8
NK_21
410.7
NK_22
410.2
NK_23
409.2
NK_24
409.0
NK_25
403.7
NK_26
401.5
NK_27
396.1
NK_28
395.7
NK_29
395.3
NK_30
394.8
NK_31
394.7
NK_32
394.3
NK_33
392.7
NK_34
392.2
NK_35
392.1
NK_36
391.5
NK_37
385.5
NK_38
384.6
NK_39
383.7
NK_40
381.1
NK_41
380.4
NK_42
380.0
NK_43
379.2
NK_44
377.3
NK_45
377.2
NK_46
377.1
NK_47
375.3
NK_48
374.1
NK_49
373.5
NK_50
372.6
NK_51
369.8
NK_52
369.5
NK_53
369.2
NK_54
368.3
NK_55
366.6
NK_56
364.0
NK_57
363.6
NK_58
360.3
NK_59
359.3
NK_60
358.0
NK_61
356.3
NK_62
354.2
NK_63
354.0
NK_64
353.5
NK_65
351.6
NK_66
350.7
NK_67
349.5
NK_68
349.1
NK_69
348.3
NK_70
347.6
NK_71
346.2
NK_72
345.6
NK_73
344.0
NK_74
340.4
NK_75
340.3
NK_76
340.3
NK_77
339.3
NK_78
338.7
NK_79
337.6
NK_80
337.6
NK_81
337.2
NK_82
331.9
NK_83
328.3
NK_84
322.1
NK_85
315.9
NK_86
315.3
NK_87
312.6
NK_88
311.1
NK_89
305.6
NK_90
301.4
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.