A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3491.1
nTPM
Monaco:
2295.3
nTPM
Schmiedel:
431.3
TPM
B-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
3491.1
HPA sample
nTPM
Memory B-cell nTPM: 3491.1
Samples: 6
Max nTPM: 3747.7
Min nTPM: 3041.8
P10809_1017
3259.1
P10809_1025
3642.0
P10809_1044
3747.7
P10809_1063
3041.8
P10809_1092
3711.7
P10809_1105
3544.1
Naive B-cell nTPM: 3324.1
Samples: 6
Max nTPM: 3988.1
Min nTPM: 2667.9
P10809_1011
3172.3
P10809_1029
3477.1
P10809_1048
2667.9
P10809_1067
3287.7
P10809_1091
3351.7
P10809_1104
3988.1
B-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
2295.3
Monaco sample
nTPM
Exhausted memory B-cell nTPM: 2149.4
Samples: 4
Max nTPM: 3517.9
Min nTPM: 1246.6
RHH5310_R3677
2133.7
RHH5218_R3590
1246.6
RHH5247_R3619
3517.9
RHH5276_R3648
1699.5
Naive B-cell nTPM: 2295.4
Samples: 4
Max nTPM: 2882.1
Min nTPM: 1847.4
RHH5308_R3675
2882.1
RHH5216_R3588
1847.4
RHH5245_R3617
2573.9
RHH5274_R3646
1878.0
Non-switched memory B-cell nTPM: 1962.4
Samples: 4
Max nTPM: 2450.2
Min nTPM: 1511.9
RHH5309_R3676
2450.2
RHH5217_R3589
1511.9
RHH5246_R3618
1987.5
RHH5275_R3647
1900.1
Plasmablast nTPM: 1628.1
Samples: 4
Max nTPM: 1995.9
Min nTPM: 1171.9
RHH5312_R3679
1995.9
RHH5220_R3592
1171.9
RHH5249_R3621
1841.2
RHH5278_R3650
1503.3
Switched memory B-cell nTPM: 1982.4
Samples: 4
Max nTPM: 2780.1
Min nTPM: 1606.7
RHH5311_R3678
2780.1
RHH5219_R3591
1849.2
RHH5248_R3620
1606.7
RHH5277_R3649
1693.6
B-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
431.3
Schmiedel sample id
TPM
Naive B-cell TPM: 431.3
Samples: 91
Max TPM: 532.8
Min TPM: 266.6
B_CELL_NAIVE_1
532.8
B_CELL_NAIVE_2
487.7
B_CELL_NAIVE_3
482.2
B_CELL_NAIVE_4
481.8
B_CELL_NAIVE_5
475.1
B_CELL_NAIVE_6
474.7
B_CELL_NAIVE_7
470.0
B_CELL_NAIVE_8
470.0
B_CELL_NAIVE_9
469.4
B_CELL_NAIVE_10
468.8
B_CELL_NAIVE_11
467.2
B_CELL_NAIVE_12
463.1
B_CELL_NAIVE_13
462.4
B_CELL_NAIVE_14
462.2
B_CELL_NAIVE_15
459.7
B_CELL_NAIVE_16
459.3
B_CELL_NAIVE_17
459.3
B_CELL_NAIVE_18
458.5
B_CELL_NAIVE_19
457.5
B_CELL_NAIVE_20
453.5
B_CELL_NAIVE_21
453.1
B_CELL_NAIVE_22
452.8
B_CELL_NAIVE_23
452.6
B_CELL_NAIVE_24
451.7
B_CELL_NAIVE_25
451.2
B_CELL_NAIVE_26
451.1
B_CELL_NAIVE_27
451.1
B_CELL_NAIVE_28
449.4
B_CELL_NAIVE_29
447.4
B_CELL_NAIVE_30
447.2
B_CELL_NAIVE_31
447.2
B_CELL_NAIVE_32
446.2
B_CELL_NAIVE_33
446.1
B_CELL_NAIVE_34
443.9
B_CELL_NAIVE_35
442.1
B_CELL_NAIVE_36
441.4
B_CELL_NAIVE_37
441.4
B_CELL_NAIVE_38
441.3
B_CELL_NAIVE_39
440.6
B_CELL_NAIVE_40
440.2
B_CELL_NAIVE_41
440.2
B_CELL_NAIVE_42
440.1
B_CELL_NAIVE_43
438.3
B_CELL_NAIVE_44
434.9
B_CELL_NAIVE_45
434.8
B_CELL_NAIVE_46
433.1
B_CELL_NAIVE_47
433.0
B_CELL_NAIVE_48
431.6
B_CELL_NAIVE_49
429.3
B_CELL_NAIVE_50
427.9
B_CELL_NAIVE_51
427.7
B_CELL_NAIVE_52
427.3
B_CELL_NAIVE_53
426.1
B_CELL_NAIVE_54
425.2
B_CELL_NAIVE_55
422.9
B_CELL_NAIVE_56
422.8
B_CELL_NAIVE_57
422.6
B_CELL_NAIVE_58
420.9
B_CELL_NAIVE_59
418.9
B_CELL_NAIVE_60
418.0
B_CELL_NAIVE_61
417.7
B_CELL_NAIVE_62
416.2
B_CELL_NAIVE_63
416.1
B_CELL_NAIVE_64
415.9
B_CELL_NAIVE_65
415.6
B_CELL_NAIVE_66
415.5
B_CELL_NAIVE_67
415.0
B_CELL_NAIVE_68
414.8
B_CELL_NAIVE_69
413.7
B_CELL_NAIVE_70
412.6
B_CELL_NAIVE_71
411.9
B_CELL_NAIVE_72
410.8
B_CELL_NAIVE_73
410.6
B_CELL_NAIVE_74
410.4
B_CELL_NAIVE_75
408.7
B_CELL_NAIVE_76
403.8
B_CELL_NAIVE_77
403.6
B_CELL_NAIVE_78
403.5
B_CELL_NAIVE_79
401.2
B_CELL_NAIVE_80
399.5
B_CELL_NAIVE_81
399.0
B_CELL_NAIVE_82
397.4
B_CELL_NAIVE_83
396.6
B_CELL_NAIVE_84
394.4
B_CELL_NAIVE_85
392.5
B_CELL_NAIVE_86
387.8
B_CELL_NAIVE_87
381.5
B_CELL_NAIVE_88
366.9
B_CELL_NAIVE_89
361.8
B_CELL_NAIVE_90
356.0
B_CELL_NAIVE_91
266.6
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.