A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2258.7
nTPM
Monaco:
1547.3
nTPM
Schmiedel:
280.6
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
2258.7
HPA sample
nTPM
Classical monocyte nTPM: 2258.7
Samples: 6
Max nTPM: 4760.3
Min nTPM: 1448.0
P10809_1003
4760.3
P10809_1020
2061.5
P10809_1039
1762.5
P10809_1058
1506.6
P10809_1080
1448.0
P10809_1107
2013.4
Intermediate monocyte nTPM: 1884.1
Samples: 6
Max nTPM: 2433.9
Min nTPM: 1267.0
P10809_1004
1975.9
P10809_1023
2352.2
P10809_1042
1820.0
P10809_1061
1455.3
P10809_1081
1267.0
P10809_1108
2433.9
Non-classical monocyte nTPM: 1611.9
Samples: 5
Max nTPM: 2219.1
Min nTPM: 1068.8
P10809_1005
1924.4
P10809_1053
1429.9
P10809_1072
1417.5
P10809_1082
1068.8
P10809_1109
2219.1
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1547.3
Monaco sample
nTPM
Classical monocyte nTPM: 1437.1
Samples: 4
Max nTPM: 1623.9
Min nTPM: 1158.0
RHH5313_R3680
1511.4
RHH5221_R3593
1158.0
RHH5250_R3622
1623.9
RHH5279_R3651
1455.2
Intermediate monocyte nTPM: 1547.3
Samples: 4
Max nTPM: 1810.9
Min nTPM: 1375.0
RHH5314_R3681
1810.9
RHH5222_R3594
1417.0
RHH5251_R3623
1586.1
RHH5280_R3652
1375.0
Non-classical monocyte nTPM: 1223.9
Samples: 4
Max nTPM: 1477.6
Min nTPM: 1071.1
RHH5315_R3682
1477.6
RHH5223_R3595
1071.1
RHH5252_R3624
1255.6
RHH5281_R3653
1091.1
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
280.6
Schmiedel sample id
TPM
Classical monocyte TPM: 276.8
Samples: 91
Max TPM: 333.9
Min TPM: 220.0
MONOCYTES_1
333.9
MONOCYTES_2
327.6
MONOCYTES_3
326.4
MONOCYTES_4
322.3
MONOCYTES_5
319.4
MONOCYTES_6
318.4
MONOCYTES_7
316.8
MONOCYTES_8
315.7
MONOCYTES_9
315.0
MONOCYTES_10
314.2
MONOCYTES_11
311.8
MONOCYTES_12
308.7
MONOCYTES_13
304.7
MONOCYTES_14
304.7
MONOCYTES_15
302.4
MONOCYTES_16
300.6
MONOCYTES_17
299.9
MONOCYTES_18
299.7
MONOCYTES_19
296.4
MONOCYTES_20
296.2
MONOCYTES_21
295.4
MONOCYTES_22
294.4
MONOCYTES_23
292.3
MONOCYTES_24
292.0
MONOCYTES_25
291.7
MONOCYTES_26
291.5
MONOCYTES_27
290.2
MONOCYTES_28
289.9
MONOCYTES_29
288.9
MONOCYTES_30
286.5
MONOCYTES_31
284.6
MONOCYTES_32
283.8
MONOCYTES_33
283.0
MONOCYTES_34
282.8
MONOCYTES_35
282.6
MONOCYTES_36
282.1
MONOCYTES_37
280.6
MONOCYTES_38
280.5
MONOCYTES_39
280.4
MONOCYTES_40
280.1
MONOCYTES_41
279.5
MONOCYTES_42
279.3
MONOCYTES_43
279.2
MONOCYTES_44
278.8
MONOCYTES_45
278.7
MONOCYTES_46
277.3
MONOCYTES_47
276.7
MONOCYTES_48
276.7
MONOCYTES_49
276.5
MONOCYTES_50
276.4
MONOCYTES_51
275.4
MONOCYTES_52
275.1
MONOCYTES_53
274.8
MONOCYTES_54
274.5
MONOCYTES_55
274.1
MONOCYTES_56
272.9
MONOCYTES_57
272.7
MONOCYTES_58
272.4
MONOCYTES_59
271.2
MONOCYTES_60
270.2
MONOCYTES_61
269.9
MONOCYTES_62
269.5
MONOCYTES_63
267.3
MONOCYTES_64
264.8
MONOCYTES_65
264.3
MONOCYTES_66
264.2
MONOCYTES_67
264.1
MONOCYTES_68
263.0
MONOCYTES_69
262.0
MONOCYTES_70
261.9
MONOCYTES_71
261.7
MONOCYTES_72
259.0
MONOCYTES_73
256.9
MONOCYTES_74
255.7
MONOCYTES_75
255.2
MONOCYTES_76
250.2
MONOCYTES_77
249.3
MONOCYTES_78
248.2
MONOCYTES_79
244.8
MONOCYTES_80
242.3
MONOCYTES_81
240.5
MONOCYTES_82
239.3
MONOCYTES_83
239.0
MONOCYTES_84
236.6
MONOCYTES_85
233.7
MONOCYTES_86
226.6
MONOCYTES_87
225.2
MONOCYTES_88
224.8
MONOCYTES_89
223.2
MONOCYTES_90
221.3
MONOCYTES_91
220.0
Show allShow less
Non-classical monocyte TPM: 280.6
Samples: 90
Max TPM: 351.2
Min TPM: 221.4
M2_1
351.2
M2_2
349.0
M2_3
348.4
M2_4
343.0
M2_5
342.6
M2_6
332.2
M2_7
328.2
M2_8
322.2
M2_9
317.6
M2_10
317.4
M2_11
315.4
M2_12
309.3
M2_13
308.9
M2_14
306.7
M2_15
305.9
M2_16
305.0
M2_17
304.4
M2_18
302.3
M2_19
302.1
M2_20
301.0
M2_21
300.1
M2_22
298.5
M2_23
295.7
M2_24
294.6
M2_25
294.0
M2_26
292.5
M2_27
292.2
M2_28
289.0
M2_29
288.2
M2_30
288.2
M2_31
287.7
M2_32
287.5
M2_33
287.3
M2_34
284.1
M2_35
283.1
M2_36
283.0
M2_37
282.9
M2_38
281.5
M2_39
280.7
M2_40
280.5
M2_41
280.1
M2_42
277.6
M2_43
277.4
M2_44
276.9
M2_45
276.9
M2_46
276.8
M2_47
275.5
M2_48
274.9
M2_49
274.0
M2_50
273.9
M2_51
272.9
M2_52
272.2
M2_53
271.0
M2_54
271.0
M2_55
270.9
M2_56
270.4
M2_57
270.0
M2_58
269.6
M2_59
268.3
M2_60
268.0
M2_61
267.7
M2_62
266.7
M2_63
266.6
M2_64
266.3
M2_65
265.6
M2_66
264.6
M2_67
264.3
M2_68
263.2
M2_69
262.7
M2_70
261.2
M2_71
260.8
M2_72
260.3
M2_73
259.8
M2_74
259.5
M2_75
257.4
M2_76
256.3
M2_77
255.4
M2_78
255.1
M2_79
254.8
M2_80
254.7
M2_81
254.1
M2_82
248.5
M2_83
243.4
M2_84
243.2
M2_85
243.1
M2_86
236.3
M2_87
234.7
M2_88
232.8
M2_89
225.2
M2_90
221.4
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.