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  • TISSUE

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  • MAGED1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:116.6 nTPM
HPA Brain:244.9 nTPM
GTEx:116.6 nTPM
Pig:169.8 nTPM
Mouse:600.1 nTPM
Allen mouse:24.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

244.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 244.9
2226 Male, age 75, left hemisphere 309.9
1961 Female, age 42, unknown 179.8
Dorsomedial nucleus
nTPM: 150.9
2041 Female, age 72, unknown 181.3
1989 Male, age 62, unknown 146.3
2017 Female, age 42, unknown 125.1
Lateral hypothalamic area
nTPM: 208.7
1791 Male, age 80, right hemisphere 260.1
2271 Male, age 75, both hemispheres 211.6
2228 Male, age 66, unknown 196.8
2412 Male, age 62, unknown 166.6
Mammillary body
nTPM: 110.4
1923 Female, age 72, unknown 140.5
2413 Male, age 66, unknown 131.0
1948 Female, age 72, unknown 100.9
1945 Male, age 80, right hemisphere 99.5
1834 Female, age 42, unknown 80.1
Paraventricular nucleus
nTPM: 158.7
2700 Male, age 62, unknown 158.7
Preoptic area
nTPM: 167.7
1907 Male, age 80, right hemisphere 224.6
2414 Female, age 72, unknown 142.9
1861 Female, age 42, unknown 135.5
Supraoptic nucleus
nTPM: 159.3
2835 Female, age 72, unknown 172.8
1894 Female, age 72, unknown 164.9
2043 Male, age 62, unknown 140.2
Ventromedial nucleus
nTPM: 191.4
1982 Female, age 72, unknown 210.2
1822 Female, age 42, unknown 172.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 116.6
Samples: 257

Max nTPM: 238.6
Min nTPM: 30.4
Std nTPM: 46.7
Median nTPM: 113.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 238.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 233.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 223.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 219.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 211.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 210.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 209.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 209.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 205.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 203.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 203.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 202.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 195.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 193.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 192.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 190.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 189.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 187.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 184.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 184.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 183.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 183.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 181.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 180.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 179.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 179.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 179.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 178.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 177.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 177.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 177.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 176.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 175.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 174.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 174.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 174.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 173.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 170.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 170.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 169.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 168.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 168.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 166.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 166.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 165.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 165.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 164.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 164.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 163.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 161.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 161.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 161.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 160.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 160.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 158.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 157.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 157.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 156.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 156.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 156.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 154.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 154.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 154.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 153.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 152.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 152.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 149.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 148.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 148.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 147.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 147.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 147.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 146.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 146.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 146.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 146.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 145.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 145.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 143.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 142.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 141.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 141.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 141.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 141.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 140.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 140.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 139.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 138.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 138.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 138.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 136.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 136.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 135.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 135.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 134.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 133.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 132.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 130.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 130.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 130.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 128.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 128.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 127.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 126.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 126.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 125.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 124.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 123.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 123.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 121.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 121.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 121.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 120.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 120.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 120.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 118.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 117.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 117.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 116.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 116.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 116.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 116.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 116.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 115.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 114.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 114.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 114.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 113.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 113.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 113.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 112.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 111.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 110.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 110.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 109.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 109.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 108.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 107.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 107.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 107.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 107.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 106.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 105.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 104.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 104.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 104.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 104.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 104.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 103.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 103.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 101.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 99.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 99.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 99.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 98.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 98.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 97.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 97.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 97.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 97.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 96.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 95.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 95.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 94.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 94.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 92.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 91.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 90.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 89.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 89.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 89.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 88.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 87.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 87.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 85.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 85.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 83.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 83.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 83.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 83.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 83.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 82.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 81.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 81.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 81.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 81.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 81.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 80.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 80.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 80.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 80.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 80.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 80.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 80.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 79.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 78.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 77.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 77.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 77.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 77.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 77.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 77.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 76.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 75.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 75.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 74.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 74.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 73.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 73.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 72.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 72.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 72.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 72.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 72.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 71.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 70.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 69.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 68.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 68.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 64.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 64.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 64.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 63.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 63.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 63.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 63.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 63.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 62.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 62.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 60.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 59.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 58.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 55.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 54.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 52.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 50.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 50.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 49.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 48.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 47.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 46.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 45.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 44.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 44.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 43.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 42.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 42.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 40.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 39.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 39.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 37.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 35.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 34.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 33.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 32.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 31.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 30.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

169.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 169.8
Samples: 4

Max nTPM: 200.7
Min nTPM: 145.0
Sample A Female 200.7
Sample B Female 145.0
Sample C Male 158.6
Sample D Male 175.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

600.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 600.1
Samples: 4

Max nTPM: 658.2
Min nTPM: 542.1
Sample A Male 629.0
Sample B Male 658.2
Sample C Female 570.9
Sample D Female 542.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

24.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 24.4
69015619 Antisense, RP_050315_01_D02, Mouse strain C57BL/6J (56 days, male) 24.4

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