HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:1142.2 nTPM
HPA Brain:282.7 nTPM
GTEx:1142.2 nTPM
FANTOM5:45.1 Scaled Tags Per Million
Pig:102.9 nTPM
Mouse:1012.0 nTPM
Allen mouse:1.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055060
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 282.7
Sample id Sample description nTPM
Hippocampus
nTPM: 282.7
2621 Female, age 67, right hemisphere 313.4
2529 Female, age 94, left hemisphere 302.0
1898 Male, age 80, left hemisphere 294.6
1911 Female, age 85, right hemisphere 282.0
1855 Male, age 76, left hemisphere 272.0
2148 Female, age 91, left hemisphere 232.4
Dentate gyrus
nTPM: 269.2
2530 Female, age 94, left hemisphere 368.8
2010 Male, age 76, both hemispheres 294.1
2246 Female, age 85, both hemispheres 265.7
2531 Female, age 67, both hemispheres 262.1
1927 Female, age 91, both hemispheres 224.4
2528 Male, age 74, both hemispheres 199.9
Entorhinal gyrus
nTPM: 238.4
2686 Male, age 75, right hemisphere 302.9
1787 Male, age 76, left hemisphere 258.7
2117 Female, age 91, right hemisphere 243.2
1938 Female, age 85, left hemisphere 223.3
2764 Male, age 80, right hemisphere 212.0
2613 Female, age 94, left hemisphere 190.5
Hippocampus, CA1
nTPM: 252.2
2749 Male, age 80, left hemisphere 280.2
2045 Male, age 76, both hemispheres 262.7
1873 Female, age 85, both hemispheres 259.7
2527 Male, age 74, both hemispheres 240.4
2082 Female, age 91, right hemisphere 217.9
Hippocampus, CA2
nTPM: 255.1
1892 Male, age 76, both hemispheres 293.0
2437 Female, age 94, left hemisphere 278.5
1963 Male, age 80, left hemisphere 265.2
1940 Female, age 85, left hemisphere 253.9
2249 Male, age 74, both hemispheres 222.4
2113 Female, age 91, right hemisphere 217.5
Hippocampus, CA3
nTPM: 255.8
1867 Male, age 76, both hemispheres 326.6
1891 Female, age 85, both hemispheres 282.9
2436 Male, age 74, both hemispheres 254.2
2861 Female, age 67, both hemispheres 250.6
2137 Male, age 80, left hemisphere 242.4
2620 Female, age 94, left hemisphere 178.2
Parahippocampal cortex
nTPM: 239.3
2018 Male, age 76, both hemispheres 332.2
2532 Female, age 72, left hemisphere 270.2
2245 Female, age 91, both hemispheres 249.3
1850 Male, age 80, both hemispheres 244.4
2250 Female, age 67, right hemisphere 231.6
2692 Male, age 74, both hemispheres 228.4
1933 Female, age 85, both hemispheres 225.3
1990 Female, age 91, right hemisphere 217.3
2622 Female, age 67, right hemisphere 212.5
2693 Female, age 94, both hemispheres 182.3
Perirhinal gyrus
nTPM: 245.8
1841 Female, age 85, right hemisphere 302.7
2848 Male, age 76, right hemisphere 255.1
1794 Male, age 80, right hemisphere 237.2
1847 Female, age 91, left hemisphere 227.3
2521 Female, age 94, right hemisphere 206.7
Subiculum
nTPM: 278.9
2042 Male, age 76, both hemispheres 346.1
2438 Female, age 94, left hemisphere 335.9
1901 Male, age 80, both hemispheres 291.4
1977 Female, age 85, both hemispheres 272.1
2619 Male, age 74, both hemispheres 219.3
2729 Female, age 91, right hemisphere 208.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1142.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1142.2
Samples: 255

Max nTPM: 3074.4
Min nTPM: 461.8
Std nTPM: 393.1
Median nTPM: 1048.4
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 3074.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2622.1
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2550.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2451.9
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 2327.1
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 2116.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2055.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2052.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2046.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2046.2
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 2028.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 45.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.1
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 32.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 102.9
Pig sample Sample description nTPM
Subiculum
nTPM: 92.7
Samples: 4

Max nTPM: 132.0
Min nTPM: 73.4
Sample A Female 132.0
Sample B Female 90.5
Sample C Male 73.4
Sample D Male 75.0
Dorsal hippocampus
nTPM: 102.9
Samples: 4

Max nTPM: 132.9
Min nTPM: 68.5
Sample A Female 132.9
Sample B Female 86.1
Sample C Male 124.1
Sample D Male 68.5
Entorhinal cortex
nTPM: 94.5
Samples: 4

Max nTPM: 118.2
Min nTPM: 70.9
Sample A Female 83.4
Sample B Female 118.2
Sample C Male 105.3
Sample D Male 70.9
Ventral hippocampus
nTPM: 86.0
Samples: 4

Max nTPM: 95.7
Min nTPM: 81.1
Sample A Female 95.7
Sample B Female 83.0
Sample C Male 84.1
Sample D Male 81.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1012.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 882.3
Samples: 4

Max nTPM: 962.7
Min nTPM: 844.5
Sample A Male 858.7
Sample B Male 863.3
Sample C Female 962.7
Sample D Female 844.5
Hippocampal formation
nTPM: 1012.0
Samples: 4

Max nTPM: 1082.5
Min nTPM: 915.0
Sample A Male 1077.0
Sample B Male 915.0
Sample C Female 1082.5
Sample D Female 973.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
71763583 Antisense, RP_050921_02_C07, Mouse strain C57BL/6J (56 days, male) 1.1

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