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PTP4A2
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  • TISSUE

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  • PTP4A2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:159.3 nTPM
HPA Brain:367.1 nTPM
GTEx:159.3 nTPM
Pig:168.9 nTPM
Mouse:100.2 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

367.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 171.5
2226 Male, age 75, left hemisphere 183.3
1961 Female, age 42, unknown 159.6
Dorsomedial nucleus
nTPM: 217.9
2017 Female, age 42, unknown 270.6
2041 Female, age 72, unknown 193.8
1989 Male, age 62, unknown 189.3
Lateral hypothalamic area
nTPM: 253.5
2412 Male, age 62, unknown 342.8
2228 Male, age 66, unknown 256.0
2271 Male, age 75, both hemispheres 212.9
1791 Male, age 80, right hemisphere 202.4
Mammillary body
nTPM: 321.3
1834 Female, age 42, unknown 369.2
1945 Male, age 80, right hemisphere 354.4
1948 Female, age 72, unknown 352.2
1923 Female, age 72, unknown 267.5
2413 Male, age 66, unknown 263.3
Paraventricular nucleus
nTPM: 367.1
2700 Male, age 62, unknown 367.1
Preoptic area
nTPM: 278.6
2414 Female, age 72, unknown 354.3
1861 Female, age 42, unknown 294.2
1907 Male, age 80, right hemisphere 187.2
Supraoptic nucleus
nTPM: 260.5
2043 Male, age 62, unknown 303.7
1894 Female, age 72, unknown 242.8
2835 Female, age 72, unknown 234.9
Ventromedial nucleus
nTPM: 207.6
1982 Female, age 72, unknown 226.9
1822 Female, age 42, unknown 188.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 159.3
Samples: 257

Max nTPM: 964.1
Min nTPM: 43.5
Std nTPM: 127.1
Median nTPM: 119.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 964.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 805.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 687.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 652.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 612.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 552.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 547.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 531.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 524.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 508.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 506.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 395.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 395.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 369.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 365.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 359.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 350.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 342.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 322.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 316.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 307.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 306.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 299.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 299.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 296.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 278.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 272.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 270.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 266.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 262.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 261.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 259.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 258.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 257.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 255.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 250.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 250.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 246.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 243.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 242.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 242.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 241.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 241.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 237.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 236.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 234.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 234.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 233.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 231.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 227.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 221.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 218.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 214.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 213.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 210.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 207.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 204.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 203.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 203.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 202.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 202.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 198.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 198.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 194.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 194.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 192.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 190.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 188.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 188.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 183.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 182.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 181.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 181.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 179.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 176.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 176.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 175.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 171.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 167.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 167.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 166.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 163.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 161.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 160.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 159.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 157.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 153.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 152.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 151.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 149.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 149.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 149.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 147.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 146.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 144.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 143.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 142.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 142.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 140.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 139.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 139.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 138.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 138.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 138.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 138.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 138.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 137.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 136.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 136.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 136.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 136.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 136.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 134.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 132.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 132.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 132.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 131.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 131.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 130.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 129.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 126.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 125.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 122.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 122.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 121.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 121.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 120.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 120.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 119.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 119.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 117.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 116.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 112.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 111.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 111.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 110.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 109.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 109.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 109.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 108.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 107.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 107.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 107.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 106.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 106.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 106.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 103.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 103.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 103.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 99.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 99.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 98.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 98.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 97.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 96.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 96.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 95.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 94.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 94.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 94.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 94.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 92.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 92.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 91.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 91.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 90.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 90.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 89.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 89.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 88.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 88.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 87.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 87.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 87.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 86.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 86.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 85.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 85.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 85.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 85.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 84.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 84.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 84.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 83.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 83.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 83.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 83.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 83.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 82.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 82.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 81.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 81.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 81.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 81.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 80.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 80.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 79.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 79.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 78.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 78.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 78.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 77.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 77.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 76.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 76.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 76.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 76.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 76.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 75.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 75.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 74.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 73.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 73.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 72.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 72.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 71.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 71.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 71.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 71.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 70.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 69.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 69.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 69.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 69.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 69.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 68.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 68.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 67.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 67.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 66.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 66.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 65.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 65.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 65.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 65.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 64.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 64.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 63.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 63.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 63.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 63.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 63.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 63.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 62.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 62.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 61.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 60.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 59.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 56.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 55.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 55.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 54.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 54.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 53.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 53.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 52.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 43.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 169.0
Samples: 4

Max nTPM: 222.8
Min nTPM: 120.7
Sample A Female 222.8
Sample B Female 168.6
Sample C Male 163.7
Sample D Male 120.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 100.3
Samples: 4

Max nTPM: 103.2
Min nTPM: 96.6
Sample A Male 96.6
Sample B Male 103.2
Sample C Female 101.6
Sample D Female 99.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.5
71280538 Antisense, RP_050818_01_A11, Mouse strain C57BL/6J (56 days, male) 0.8
77799059 Antisense, RP_070212_03_E04, Mouse strain C57BL/6J (56 days, male) 0.5
70813353 Antisense, RP_050712_03_G08, Mouse strain C57BL/6J (56 days, male) 0.0

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