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PTP4A2
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  • PTP4A2
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:290.2 nTPM
HPA Brain:398.1 nTPM
GTEx:290.2 nTPM
FANTOM5:243.5 Scaled Tags Per Million
Pig:217.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

398.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 283.5
2048 Male, age 55, midline 344.6
1981 Female, age 72, midline 282.2
2194 Female, age 79, both hemispheres 276.3
2565 Male, age 75, midline 271.1
2816 Male, age 47, midline 243.0
Cervical spinal cord, dorsal horn
nTPM: 279.4
2173 Female, age 72, unknown 354.7
2069 Male, age 47, both hemispheres 282.5
2297 Male, age 75, both hemispheres 279.7
2296 Male, age 66, both hemispheres 275.3
1877 Male, age 55, unknown 272.1
2721 Male, age 90, both hemispheres 212.0
Cervical spinal cord, ventral horn
nTPM: 398.1
2480 Male, age 75, both hemispheres 605.2
2295 Male, age 66, both hemispheres 455.4
2809 Male, age 90, both hemispheres 438.3
2068 Male, age 55, unknown 325.1
2820 Female, age 79, both hemispheres 289.4
2098 Female, age 72, unknown 275.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

290.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 290.2
Samples: 204

Max nTPM: 941.9
Min nTPM: 120.0
Std nTPM: 122.0
Median nTPM: 263.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 941.9
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 783.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 669.9
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 634.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 626.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 582.9
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 550.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 545.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 544.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 539.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 526.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 517.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 489.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 480.4
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 479.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 472.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 469.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 463.7
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 458.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 453.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 450.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 446.4
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 435.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 427.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 425.7
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 423.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 418.8
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 417.2
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 414.3
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 397.3
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 396.7
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 394.1
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 388.2
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 387.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 380.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 380.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 377.0
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 376.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 375.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 370.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 369.4
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 361.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 359.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 359.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 357.5
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 356.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 351.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 351.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 351.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 347.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 339.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 337.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 337.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 336.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 335.2
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 334.5
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 331.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 330.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 326.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 326.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 324.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 321.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 321.7
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 319.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 318.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 318.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 315.4
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 315.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 313.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 311.9
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 309.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 309.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 308.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 305.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 304.5
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 301.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 300.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 300.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 298.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 297.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 297.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 295.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 294.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 293.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 289.8
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 289.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 289.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 289.1
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 285.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 284.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 280.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 280.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 279.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 277.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 275.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 273.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 272.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 270.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 265.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 264.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 264.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 264.2
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 262.9
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 262.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 262.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 261.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 261.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 260.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 258.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 257.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 254.7
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 250.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 247.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 247.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 247.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 245.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 243.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 242.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 241.7
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 241.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 240.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 239.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 239.5
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 239.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 238.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 237.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 235.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 234.9
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 232.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 231.3
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 230.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 228.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 225.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 221.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 220.8
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 220.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 219.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 218.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 216.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 215.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 213.4
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 213.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 212.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 211.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 209.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 207.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 206.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 204.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 204.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 202.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 201.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 200.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 200.5
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 200.0
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 199.6
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 199.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 199.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 196.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 194.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 194.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 194.1
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 194.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 193.4
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 192.7
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 191.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 190.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 187.7
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 187.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 186.9
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 186.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 186.1
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 185.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 184.7
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 184.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 183.3
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 182.4
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 180.5
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 180.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 178.9
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 177.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 176.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 173.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 167.7
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 165.5
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 164.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 163.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 163.1
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 162.0
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 160.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 159.3
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 158.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 158.2
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 156.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 156.2
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 146.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 144.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 142.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 138.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 138.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 137.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 135.8
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 135.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 127.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 120.0
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

243.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 243.5
FF:10181-103D1 60 years, female 250.9
FF:10159-103A6 76 years, female 236.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.8
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 200.7
Samples: 4

Max nTPM: 236.0
Min nTPM: 178.1
Sample A Female 197.2
Sample B Female 236.0
Sample C Male 191.4
Sample D Male 178.1
Ventral spinal cord
nTPM: 217.8
Samples: 4

Max nTPM: 233.2
Min nTPM: 192.9
Sample A Female 233.2
Sample B Female 212.5
Sample C Male 192.9
Sample D Male 232.7

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