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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
508.7
nTPM
Monaco:
336.6
nTPM
Schmiedel:
154.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
508.7
HPA sample
nTPM
gdT-cell nTPM: 508.7
Samples: 6
Max nTPM: 698.2
Min nTPM: 302.3
P10809_1007
302.3
P10809_1022
698.2
P10809_1041
671.6
P10809_1060
420.3
P10809_1077
428.4
P10809_1098
531.5
MAIT T-cell nTPM: 455.5
Samples: 6
Max nTPM: 554.1
Min nTPM: 263.2
P10809_1006
263.2
P10809_1024
550.8
P10809_1043
554.1
P10809_1062
480.5
P10809_1083
403.1
P10809_1097
481.4
Memory CD4 T-cell nTPM: 506.0
Samples: 6
Max nTPM: 647.9
Min nTPM: 293.8
P10809_1014
293.8
P10809_1026
618.7
P10809_1045
647.9
P10809_1064
487.6
P10809_1086
498.9
P10809_1113
488.8
Memory CD8 T-cell nTPM: 507.4
Samples: 5
Max nTPM: 654.6
Min nTPM: 301.0
P10809_1012
301.0
P10809_1027
580.7
P10809_1046
654.6
P10809_1065
516.0
P10809_1111
484.8
Naive CD4 T-cell nTPM: 440.4
Samples: 6
Max nTPM: 604.5
Min nTPM: 212.3
P10809_1015
212.3
P10809_1030
537.2
P10809_1049
604.5
P10809_1068
408.7
P10809_1085
449.8
P10809_1112
430.0
Naive CD8 T-cell nTPM: 476.1
Samples: 6
Max nTPM: 569.6
Min nTPM: 226.9
P10809_1016
226.9
P10809_1031
568.8
P10809_1050
569.6
P10809_1069
535.1
P10809_1087
500.3
P10809_1110
455.6
T-reg nTPM: 458.4
Samples: 6
Max nTPM: 615.0
Min nTPM: 252.1
P10809_1018
252.1
P10809_1037
478.1
P10809_1056
615.0
P10809_1075
466.9
P10809_1094
476.7
P10809_1106
461.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
336.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 261.1
Samples: 4
Max nTPM: 309.6
Min nTPM: 152.0
RHH5202_R3573
309.6
RHH5230_R3602
296.1
RHH5259_R3631
152.0
RHH5288_R3660
286.8
Effector memory CD8 T-cell nTPM: 291.8
Samples: 4
Max nTPM: 376.3
Min nTPM: 213.6
RHH5203_R3574
300.8
RHH5231_R3603
376.3
RHH5260_R3632
213.6
RHH5289_R3661
276.6
MAIT T-cell nTPM: 288.4
Samples: 4
Max nTPM: 354.9
Min nTPM: 220.1
RHH5233_R3605
354.9
RHH5205_R3576
220.1
RHH5262_R3634
236.3
RHH5297_R3663
342.3
Memory CD4 T-cell TFH nTPM: 308.8
Samples: 4
Max nTPM: 407.4
Min nTPM: 259.3
RHH5300_R3666
259.3
RHH5236_R3608
407.4
RHH5265_R3637
269.3
RHH5208_R3579
299.3
Memory CD4 T-cell Th1 nTPM: 249.6
Samples: 4
Max nTPM: 307.8
Min nTPM: 192.7
RHH5210_R3581
296.3
RHH5302_R3668
307.8
RHH5238_R3610
201.6
RHH5267_R3639
192.7
Memory CD4 T-cell Th1/Th17 nTPM: 291.4
Samples: 4
Max nTPM: 403.8
Min nTPM: 160.8
RHH5303_R3669
401.5
RHH5211_R3582
403.8
RHH5239_R3611
160.8
RHH5268_R3640
199.6
Memory CD4 T-cell Th17 nTPM: 226.3
Samples: 4
Max nTPM: 324.3
Min nTPM: 153.3
RHH5304_R3670
218.6
RHH5212_R3583
324.3
RHH5240_R3612
209.0
RHH5269_R3641
153.3
Memory CD4 T-cell Th2 nTPM: 293.8
Samples: 4
Max nTPM: 377.6
Min nTPM: 224.0
RHH5305_R3671
276.4
RHH5213_R3584
297.3
RHH5241_R3613
377.6
RHH5270_R3642
224.0
Naive CD4 T-cell nTPM: 235.0
Samples: 4
Max nTPM: 294.2
Min nTPM: 161.5
RHH5306_R3672
214.9
RHH5214_R3585
294.2
RHH5242_R3614
269.2
RHH5271_R3643
161.5
Naive CD8 T-cell nTPM: 228.1
Samples: 4
Max nTPM: 285.1
Min nTPM: 121.4
RHH5201_R3572
285.1
RHH5229_R3601
121.4
RHH5258_R3630
272.9
RHH5287_R3659
232.9
Non-Vd2 gdTCR nTPM: 336.6
Samples: 4
Max nTPM: 422.1
Min nTPM: 249.6
RHH5235_R3607
249.6
RHH5264_R3636
422.1
RHH5207_R3578
331.3
RHH5299_R3665
343.4
T-reg nTPM: 242.4
Samples: 4
Max nTPM: 322.2
Min nTPM: 167.1
RHH5301_R3667
241.2
RHH5237_R3609
322.2
RHH5266_R3638
167.1
RHH5209_R3580
238.9
Terminal effector memory CD4 T-cell nTPM: 282.5
Samples: 2
Max nTPM: 361.3
Min nTPM: 203.6
RHH5243_R3615
203.6
RHH5272_R3644
361.3
Terminal effector memory CD8 T-cell nTPM: 333.9
Samples: 4
Max nTPM: 389.0
Min nTPM: 223.0
RHH5232_R3604
389.0
RHH5204_R3575
345.1
RHH5261_R3633
223.0
RHH5296_R3662
378.3
Vd2 gdTCR nTPM: 320.6
Samples: 4
Max nTPM: 376.9
Min nTPM: 215.7
RHH5234_R3606
347.4
RHH5206_R3577
376.9
RHH5263_R3635
215.7
RHH5298_R3664
342.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.