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IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:10.3 nTPM
Monaco:84.5 nTPM
Schmiedel:123.4 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

10.3
HPA sample nTPM
NK-cell
nTPM: 10.3
Samples: 6

Max nTPM: 18.4
Min nTPM: 0.0
P10809_1013 10.2
P10809_1033 9.0
P10809_1052 18.4
P10809_1071 12.4
P10809_1093 0.0
P10809_1103 12.0

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

84.5
Monaco sample nTPM
NK-cell
nTPM: 84.5
Samples: 4

Max nTPM: 96.9
Min nTPM: 75.0
RHH5316_R3683 75.0
RHH5224_R3596 77.1
RHH5253_R3625 96.9
RHH5282_R3654 89.1

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

123.4
Schmiedel sample id TPM
NK-cell
TPM: 123.4
Samples: 90

Max TPM: 165.3
Min TPM: 64.9
NK_1 165.3
NK_2 164.3
NK_3 161.8
NK_4 161.6
NK_5 160.1
NK_6 151.6
NK_7 150.9
NK_8 150.2
NK_9 145.9
NK_10 145.6
NK_11 144.9
NK_12 144.1
NK_13 143.5
NK_14 142.6
NK_15 141.3
NK_16 140.4
NK_17 139.4
NK_18 135.5
NK_19 134.6
NK_20 134.6
NK_21 133.8
NK_22 132.7
NK_23 132.2
NK_24 131.9
NK_25 131.6
NK_26 130.9
NK_27 130.9
NK_28 129.1
NK_29 128.0
NK_30 126.9
NK_31 126.5
NK_32 125.7
NK_33 125.3
NK_34 125.2
NK_35 125.2
NK_36 125.1
NK_37 124.2
NK_38 123.4
NK_39 123.4
NK_40 123.4
NK_41 122.9
NK_42 122.7
NK_43 121.9
NK_44 121.8
NK_45 121.8
NK_46 121.6
NK_47 121.0
NK_48 120.3
NK_49 119.9
NK_50 118.6
NK_51 118.5
NK_52 118.4
NK_53 118.1
NK_54 117.9
NK_55 117.8
NK_56 117.8
NK_57 117.3
NK_58 117.3
NK_59 116.7
NK_60 116.7
NK_61 116.4
NK_62 115.9
NK_63 113.7
NK_64 113.6
NK_65 113.2
NK_66 112.7
NK_67 112.2
NK_68 111.9
NK_69 111.8
NK_70 111.6
NK_71 111.6
NK_72 110.6
NK_73 110.1
NK_74 109.7
NK_75 109.7
NK_76 109.4
NK_77 108.6
NK_78 108.3
NK_79 108.1
NK_80 105.7
NK_81 105.2
NK_82 104.1
NK_83 103.8
NK_84 103.3
NK_85 102.3
NK_86 101.5
NK_87 99.8
NK_88 99.5
NK_89 98.5
NK_90 64.9
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