A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
20.8
nTPM
Monaco:
25.0
nTPM
Schmiedel:
21.5
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
20.8
HPA sample
nTPM
NK-cell nTPM: 20.8
Samples: 6
Max nTPM: 32.9
Min nTPM: 8.6
P10809_1013
8.6
P10809_1033
32.9
P10809_1052
27.8
P10809_1071
13.7
P10809_1093
13.6
P10809_1103
28.0
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
25.0
Monaco sample
nTPM
NK-cell nTPM: 25.0
Samples: 4
Max nTPM: 27.0
Min nTPM: 22.0
RHH5316_R3683
27.0
RHH5224_R3596
26.8
RHH5253_R3625
22.0
RHH5282_R3654
24.4
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
21.5
Schmiedel sample id
TPM
NK-cell TPM: 21.5
Samples: 90
Max TPM: 40.6
Min TPM: 7.7
NK_1
40.6
NK_2
39.9
NK_3
38.8
NK_4
35.6
NK_5
35.2
NK_6
34.9
NK_7
32.5
NK_8
31.5
NK_9
31.4
NK_10
31.3
NK_11
31.2
NK_12
30.0
NK_13
29.5
NK_14
28.7
NK_15
28.6
NK_16
27.5
NK_17
27.0
NK_18
27.0
NK_19
26.7
NK_20
26.4
NK_21
25.6
NK_22
25.4
NK_23
25.3
NK_24
25.0
NK_25
24.4
NK_26
24.3
NK_27
24.0
NK_28
23.7
NK_29
23.7
NK_30
23.4
NK_31
23.3
NK_32
22.6
NK_33
22.5
NK_34
22.2
NK_35
22.1
NK_36
22.0
NK_37
21.9
NK_38
21.8
NK_39
21.7
NK_40
21.7
NK_41
21.5
NK_42
21.2
NK_43
20.9
NK_44
20.9
NK_45
20.5
NK_46
20.3
NK_47
20.2
NK_48
20.1
NK_49
20.1
NK_50
20.1
NK_51
20.1
NK_52
19.9
NK_53
19.9
NK_54
19.6
NK_55
19.6
NK_56
19.5
NK_57
19.5
NK_58
19.2
NK_59
18.9
NK_60
18.9
NK_61
18.8
NK_62
18.7
NK_63
18.4
NK_64
18.0
NK_65
17.9
NK_66
17.9
NK_67
17.6
NK_68
17.5
NK_69
17.4
NK_70
16.2
NK_71
16.1
NK_72
15.4
NK_73
15.4
NK_74
15.1
NK_75
14.4
NK_76
14.3
NK_77
14.2
NK_78
13.4
NK_79
13.3
NK_80
13.1
NK_81
13.0
NK_82
12.6
NK_83
12.3
NK_84
12.3
NK_85
11.0
NK_86
10.9
NK_87
10.8
NK_88
8.7
NK_89
8.3
NK_90
7.7
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.