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  • SUMMARY

  • TISSUE

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  • SPTAN1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:65.6 nTPM
HPA Brain:338.8 nTPM
GTEx:65.6 nTPM
Pig:178.9 nTPM
Mouse:183.5 nTPM
Allen mouse:15.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

338.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 277.7
2226 Male, age 75, left hemisphere 293.0
1961 Female, age 42, unknown 262.5
Dorsomedial nucleus
nTPM: 293.7
1989 Male, age 62, unknown 364.1
2041 Female, age 72, unknown 268.4
2017 Female, age 42, unknown 248.6
Lateral hypothalamic area
nTPM: 338.8
2228 Male, age 66, unknown 369.0
1791 Male, age 80, right hemisphere 354.5
2271 Male, age 75, both hemispheres 352.2
2412 Male, age 62, unknown 279.4
Mammillary body
nTPM: 290.0
1923 Female, age 72, unknown 383.5
1948 Female, age 72, unknown 279.0
1834 Female, age 42, unknown 275.4
2413 Male, age 66, unknown 272.0
1945 Male, age 80, right hemisphere 239.8
Paraventricular nucleus
nTPM: 253.4
2700 Male, age 62, unknown 253.4
Preoptic area
nTPM: 265.4
1907 Male, age 80, right hemisphere 299.5
1861 Female, age 42, unknown 252.4
2414 Female, age 72, unknown 244.3
Supraoptic nucleus
nTPM: 331.4
1894 Female, age 72, unknown 375.0
2043 Male, age 62, unknown 329.1
2835 Female, age 72, unknown 290.0
Ventromedial nucleus
nTPM: 287.9
1982 Female, age 72, unknown 322.3
1822 Female, age 42, unknown 253.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 65.6
Samples: 257

Max nTPM: 130.6
Min nTPM: 22.5
Std nTPM: 20.8
Median nTPM: 63.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 130.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 114.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 113.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 111.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 109.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 109.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 108.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 106.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 106.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 105.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 104.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 104.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 103.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 103.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 102.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 102.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 102.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 101.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 101.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 100.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 100.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 99.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 99.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 99.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 98.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 98.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 97.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 96.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 96.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 94.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 92.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 91.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 91.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 90.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 90.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 90.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 89.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 89.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 88.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 88.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 87.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 87.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 87.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 86.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 85.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 85.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 85.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 85.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 84.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 84.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 84.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 83.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 83.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 83.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 83.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 82.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 81.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 81.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 80.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 80.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 79.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 79.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 79.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 79.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 78.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 78.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 78.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 78.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 78.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 78.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 77.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 77.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 77.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 77.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 76.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 76.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 75.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 75.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 75.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 75.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 75.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 74.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 74.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 74.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 73.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 73.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 73.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 73.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 72.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 72.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 72.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 72.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 72.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 71.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 71.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 71.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 70.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 69.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 69.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 69.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 69.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 69.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 69.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 68.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 68.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 68.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 68.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 67.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 67.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 67.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 67.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 67.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 66.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 66.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 66.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 66.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 65.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 65.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 65.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 65.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 64.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 64.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 64.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 64.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 64.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 64.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 64.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 64.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 63.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 63.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 63.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 63.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 62.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 62.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 62.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 61.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 61.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 61.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 61.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 61.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 60.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 60.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 60.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 60.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 60.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 60.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 59.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 59.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 58.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 58.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 58.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 58.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 58.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 58.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 58.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 57.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 57.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 57.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 57.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 57.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 57.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 57.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 56.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 56.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 56.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 56.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 55.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 55.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 54.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 54.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 53.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 53.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 53.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 53.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 53.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 53.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 53.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 53.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 52.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 52.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 50.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 50.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 50.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 50.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 50.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 50.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 50.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 50.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 50.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 50.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 49.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 49.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 49.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 49.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 49.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 48.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 48.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 48.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 47.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 47.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 47.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 47.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 47.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 47.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 46.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 46.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 46.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 45.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 45.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 44.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 44.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 44.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 44.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 44.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 43.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 43.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 43.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 43.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 43.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 42.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 42.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 42.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 42.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 42.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 41.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 41.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 41.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 41.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 41.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 41.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 41.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 40.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 39.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 39.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 39.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 39.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 39.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 38.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 38.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 38.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 37.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 37.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 36.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 36.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 36.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 35.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 35.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 34.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 32.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 31.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 31.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 31.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 30.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 28.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 27.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 22.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 22.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 178.9
Samples: 4

Max nTPM: 230.5
Min nTPM: 139.9
Sample A Female 230.5
Sample B Female 171.2
Sample C Male 174.1
Sample D Male 139.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

183.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 183.5
Samples: 4

Max nTPM: 188.6
Min nTPM: 173.2
Sample A Male 184.8
Sample B Male 173.2
Sample C Female 187.5
Sample D Female 188.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 15.8
70596059 Antisense, RP_050628_04_A03, Mouse strain C57BL/6J (56 days, male) 19.2
69885690 Antisense, RP_050512_03_C04, Mouse strain C57BL/6J (56 days, male) 12.4

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