A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
408.3
nTPM
Monaco:
29.2
nTPM
Schmiedel:
93.0
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
408.3
HPA sample
nTPM
Classical monocyte nTPM: 392.5
Samples: 6
Max nTPM: 523.1
Min nTPM: 225.8
P10809_1003
523.1
P10809_1020
399.6
P10809_1039
441.7
P10809_1058
225.8
P10809_1080
288.2
P10809_1107
476.4
Intermediate monocyte nTPM: 408.2
Samples: 6
Max nTPM: 545.4
Min nTPM: 196.2
P10809_1004
334.9
P10809_1023
486.1
P10809_1042
455.5
P10809_1061
196.2
P10809_1081
431.3
P10809_1108
545.4
Non-classical monocyte nTPM: 372.7
Samples: 5
Max nTPM: 499.1
Min nTPM: 198.6
P10809_1005
377.3
P10809_1053
355.0
P10809_1072
198.6
P10809_1082
433.7
P10809_1109
499.1
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
29.2
Monaco sample
nTPM
Classical monocyte nTPM: 21.0
Samples: 4
Max nTPM: 39.7
Min nTPM: 9.3
RHH5313_R3680
39.7
RHH5221_R3593
10.9
RHH5250_R3622
23.9
RHH5279_R3651
9.3
Intermediate monocyte nTPM: 29.2
Samples: 4
Max nTPM: 45.1
Min nTPM: 18.0
RHH5314_R3681
23.2
RHH5222_R3594
45.1
RHH5251_R3623
30.4
RHH5280_R3652
18.0
Non-classical monocyte nTPM: 21.9
Samples: 4
Max nTPM: 29.5
Min nTPM: 7.5
RHH5315_R3682
26.5
RHH5223_R3595
29.5
RHH5252_R3624
23.9
RHH5281_R3653
7.5
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
93.0
Schmiedel sample id
TPM
Classical monocyte TPM: 85.1
Samples: 91
Max TPM: 183.1
Min TPM: 27.3
MONOCYTES_1
183.1
MONOCYTES_2
176.6
MONOCYTES_3
172.5
MONOCYTES_4
170.4
MONOCYTES_5
165.3
MONOCYTES_6
162.4
MONOCYTES_7
154.6
MONOCYTES_8
151.6
MONOCYTES_9
147.0
MONOCYTES_10
138.3
MONOCYTES_11
135.5
MONOCYTES_12
125.7
MONOCYTES_13
124.3
MONOCYTES_14
121.5
MONOCYTES_15
119.5
MONOCYTES_16
118.4
MONOCYTES_17
117.9
MONOCYTES_18
115.2
MONOCYTES_19
114.5
MONOCYTES_20
114.2
MONOCYTES_21
113.1
MONOCYTES_22
111.6
MONOCYTES_23
109.2
MONOCYTES_24
109.0
MONOCYTES_25
107.9
MONOCYTES_26
107.9
MONOCYTES_27
107.3
MONOCYTES_28
106.7
MONOCYTES_29
106.6
MONOCYTES_30
105.2
MONOCYTES_31
104.8
MONOCYTES_32
104.6
MONOCYTES_33
104.6
MONOCYTES_34
103.6
MONOCYTES_35
102.4
MONOCYTES_36
100.3
MONOCYTES_37
99.8
MONOCYTES_38
99.6
MONOCYTES_39
95.2
MONOCYTES_40
94.6
MONOCYTES_41
94.0
MONOCYTES_42
92.9
MONOCYTES_43
92.8
MONOCYTES_44
92.5
MONOCYTES_45
90.5
MONOCYTES_46
89.9
MONOCYTES_47
89.4
MONOCYTES_48
88.7
MONOCYTES_49
84.0
MONOCYTES_50
81.3
MONOCYTES_51
80.4
MONOCYTES_52
78.6
MONOCYTES_53
77.2
MONOCYTES_54
69.5
MONOCYTES_55
57.7
MONOCYTES_56
57.0
MONOCYTES_57
56.0
MONOCYTES_58
53.3
MONOCYTES_59
50.3
MONOCYTES_60
49.9
MONOCYTES_61
48.7
MONOCYTES_62
48.0
MONOCYTES_63
47.8
MONOCYTES_64
47.6
MONOCYTES_65
47.6
MONOCYTES_66
47.2
MONOCYTES_67
46.9
MONOCYTES_68
45.9
MONOCYTES_69
45.2
MONOCYTES_70
44.8
MONOCYTES_71
44.7
MONOCYTES_72
44.5
MONOCYTES_73
43.9
MONOCYTES_74
43.5
MONOCYTES_75
43.3
MONOCYTES_76
43.2
MONOCYTES_77
43.0
MONOCYTES_78
42.7
MONOCYTES_79
42.2
MONOCYTES_80
41.9
MONOCYTES_81
41.5
MONOCYTES_82
41.5
MONOCYTES_83
40.9
MONOCYTES_84
40.1
MONOCYTES_85
39.0
MONOCYTES_86
37.7
MONOCYTES_87
37.6
MONOCYTES_88
31.3
MONOCYTES_89
30.5
MONOCYTES_90
28.9
MONOCYTES_91
27.3
Show allShow less
Non-classical monocyte TPM: 93.0
Samples: 90
Max TPM: 190.0
Min TPM: 29.4
M2_1
190.0
M2_2
186.2
M2_3
183.8
M2_4
181.0
M2_5
172.2
M2_6
166.6
M2_7
164.3
M2_8
156.0
M2_9
148.8
M2_10
137.2
M2_11
135.6
M2_12
135.6
M2_13
133.1
M2_14
132.3
M2_15
129.9
M2_16
129.6
M2_17
129.2
M2_18
127.6
M2_19
127.0
M2_20
126.7
M2_21
126.1
M2_22
125.9
M2_23
121.2
M2_24
119.0
M2_25
117.6
M2_26
116.7
M2_27
116.0
M2_28
115.7
M2_29
115.4
M2_30
114.7
M2_31
114.5
M2_32
113.9
M2_33
112.7
M2_34
112.4
M2_35
111.3
M2_36
110.5
M2_37
110.5
M2_38
110.4
M2_39
110.1
M2_40
110.0
M2_41
109.2
M2_42
107.3
M2_43
101.7
M2_44
101.1
M2_45
99.9
M2_46
99.9
M2_47
98.4
M2_48
91.6
M2_49
90.1
M2_50
86.9
M2_51
76.9
M2_52
72.6
M2_53
71.7
M2_54
70.9
M2_55
63.6
M2_56
62.7
M2_57
62.2
M2_58
61.7
M2_59
58.9
M2_60
58.2
M2_61
56.6
M2_62
55.5
M2_63
54.3
M2_64
54.1
M2_65
54.0
M2_66
53.5
M2_67
52.7
M2_68
52.6
M2_69
52.4
M2_70
52.2
M2_71
51.6
M2_72
49.9
M2_73
49.7
M2_74
49.6
M2_75
49.5
M2_76
49.0
M2_77
48.4
M2_78
47.3
M2_79
46.5
M2_80
44.9
M2_81
44.3
M2_82
44.3
M2_83
44.1
M2_84
43.0
M2_85
42.3
M2_86
40.2
M2_87
39.5
M2_88
39.2
M2_89
38.0
M2_90
29.4
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.