HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:406.5 nTPM
HPA Brain:120.0 nTPM
GTEx:406.5 nTPM
FANTOM5:37.0 Scaled Tags Per Million
Pig:37.5 nTPM
Mouse:33.1 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007575Antibody CAB002601Antibody CAB040549
Glial cells Not detectedLowLow
Neuronal cells LowMediumNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 120.0
Sample id Sample description nTPM
Hippocampus
nTPM: 120.0
1855 Male, age 76, left hemisphere 178.0
1898 Male, age 80, left hemisphere 159.3
2529 Female, age 94, left hemisphere 122.9
2148 Female, age 91, left hemisphere 99.9
2621 Female, age 67, right hemisphere 86.3
1911 Female, age 85, right hemisphere 73.4
Dentate gyrus
nTPM: 109.2
2010 Male, age 76, both hemispheres 172.5
2528 Male, age 74, both hemispheres 140.0
2530 Female, age 94, left hemisphere 121.3
2246 Female, age 85, both hemispheres 79.3
2531 Female, age 67, both hemispheres 75.3
1927 Female, age 91, both hemispheres 67.0
Entorhinal gyrus
nTPM: 75.7
2117 Female, age 91, right hemisphere 107.8
2764 Male, age 80, right hemisphere 83.3
1787 Male, age 76, left hemisphere 80.6
2686 Male, age 75, right hemisphere 79.7
1938 Female, age 85, left hemisphere 57.9
2613 Female, age 94, left hemisphere 45.0
Hippocampus, CA1
nTPM: 107.4
2045 Male, age 76, both hemispheres 168.0
2082 Female, age 91, right hemisphere 113.7
2527 Male, age 74, both hemispheres 92.8
1873 Female, age 85, both hemispheres 87.1
2749 Male, age 80, left hemisphere 75.6
Hippocampus, CA2
nTPM: 100.9
2249 Male, age 74, both hemispheres 135.9
1963 Male, age 80, left hemisphere 102.1
2113 Female, age 91, right hemisphere 99.2
1940 Female, age 85, left hemisphere 95.3
2437 Female, age 94, left hemisphere 93.3
1892 Male, age 76, both hemispheres 79.8
Hippocampus, CA3
nTPM: 94.2
2436 Male, age 74, both hemispheres 119.7
1867 Male, age 76, both hemispheres 108.1
2861 Female, age 67, both hemispheres 90.9
2137 Male, age 80, left hemisphere 88.8
1891 Female, age 85, both hemispheres 80.7
2620 Female, age 94, left hemisphere 76.8
Parahippocampal cortex
nTPM: 79.9
2018 Male, age 76, both hemispheres 171.1
1850 Male, age 80, both hemispheres 88.8
2250 Female, age 67, right hemisphere 86.0
1990 Female, age 91, right hemisphere 78.2
2245 Female, age 91, both hemispheres 75.2
1933 Female, age 85, both hemispheres 68.9
2693 Female, age 94, both hemispheres 61.0
2622 Female, age 67, right hemisphere 60.6
2532 Female, age 72, left hemisphere 58.6
2692 Male, age 74, both hemispheres 50.7
Perirhinal gyrus
nTPM: 85.4
2521 Female, age 94, right hemisphere 102.8
1847 Female, age 91, left hemisphere 90.4
1794 Male, age 80, right hemisphere 87.8
1841 Female, age 85, right hemisphere 82.6
2848 Male, age 76, right hemisphere 63.7
Subiculum
nTPM: 92.1
2042 Male, age 76, both hemispheres 150.0
2729 Female, age 91, right hemisphere 115.0
1901 Male, age 80, both hemispheres 91.2
1977 Female, age 85, both hemispheres 73.9
2619 Male, age 74, both hemispheres 68.3
2438 Female, age 94, left hemisphere 53.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 406.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 406.5
Samples: 255

Max nTPM: 1688.3
Min nTPM: 137.3
Std nTPM: 221.9
Median nTPM: 355.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1688.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1430.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1391.2
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 1267.2
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 1256.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 1140.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 1094.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 1029.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 992.1
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 939.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 892.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 37.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.0
FF:10153-102I9 76 years, female 39.8
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 37.5
Pig sample Sample description nTPM
Subiculum
nTPM: 34.1
Samples: 4

Max nTPM: 56.5
Min nTPM: 21.2
Sample A Female 56.5
Sample B Female 21.2
Sample C Male 29.2
Sample D Male 29.6
Dorsal hippocampus
nTPM: 37.5
Samples: 4

Max nTPM: 57.7
Min nTPM: 16.1
Sample A Female 57.7
Sample B Female 24.5
Sample C Male 51.8
Sample D Male 16.1
Entorhinal cortex
nTPM: 30.8
Samples: 4

Max nTPM: 44.0
Min nTPM: 16.3
Sample A Female 44.0
Sample B Female 25.1
Sample C Male 37.7
Sample D Male 16.3
Ventral hippocampus
nTPM: 34.6
Samples: 4

Max nTPM: 45.6
Min nTPM: 23.6
Sample A Female 43.9
Sample B Female 25.4
Sample C Male 45.6
Sample D Male 23.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 33.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 34.8
Min nTPM: 28.8
Sample A Male 33.7
Sample B Male 34.8
Sample C Female 33.6
Sample D Female 28.8
Hippocampal formation
nTPM: 33.1
Samples: 4

Max nTPM: 36.0
Min nTPM: 29.9
Sample A Male 35.6
Sample B Male 29.9
Sample C Female 31.0
Sample D Female 36.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
75695667 Antisense, RP_060518_04_D06, Mouse strain C57BL/6J (56 days, male) 0.1
77278967 Antisense, RP_070116_01_A03, Mouse strain C57BL/6J (56 days, male) 0.1

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