We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
S100A6
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • S100A6
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:701.8 nTPM
HPA Brain:483.1 nTPM
GTEx:701.8 nTPM
Pig:47.5 nTPM
Mouse:36.4 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

483.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 206.2
1961 Female, age 42, unknown 226.6
2226 Male, age 75, left hemisphere 185.8
Dorsomedial nucleus
nTPM: 175.6
2041 Female, age 72, unknown 238.6
2017 Female, age 42, unknown 156.9
1989 Male, age 62, unknown 131.4
Lateral hypothalamic area
nTPM: 238.8
1791 Male, age 80, right hemisphere 278.4
2412 Male, age 62, unknown 257.6
2271 Male, age 75, both hemispheres 233.2
2228 Male, age 66, unknown 186.1
Mammillary body
nTPM: 211.4
1923 Female, age 72, unknown 248.0
1834 Female, age 42, unknown 216.6
1945 Male, age 80, right hemisphere 202.2
2413 Male, age 66, unknown 199.2
1948 Female, age 72, unknown 190.9
Paraventricular nucleus
nTPM: 147.3
2700 Male, age 62, unknown 147.3
Preoptic area
nTPM: 158.5
1861 Female, age 42, unknown 195.7
2414 Female, age 72, unknown 142.8
1907 Male, age 80, right hemisphere 136.9
Supraoptic nucleus
nTPM: 483.1
2043 Male, age 62, unknown 696.7
1894 Female, age 72, unknown 391.5
2835 Female, age 72, unknown 361.0
Ventromedial nucleus
nTPM: 174.2
1822 Female, age 42, unknown 191.8
1982 Female, age 72, unknown 156.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

701.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 701.8
Samples: 257

Max nTPM: 3008.1
Min nTPM: 216.7
Std nTPM: 309.6
Median nTPM: 637.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 3008.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1747.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 1744.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 1708.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1635.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1569.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1508.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1489.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 1466.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1463.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1443.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1356.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1355.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1348.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 1345.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1317.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1253.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 1159.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1107.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 1089.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1081.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1056.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1054.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1051.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1049.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 1041.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 1038.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1019.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1016.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1012.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 988.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 960.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 941.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 940.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 935.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 929.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 926.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 923.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 906.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 902.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 894.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 893.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 883.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 882.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 870.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 864.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 851.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 848.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 847.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 835.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 832.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 827.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 827.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 825.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 821.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 820.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 819.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 815.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 810.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 805.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 799.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 795.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 794.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 789.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 787.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 783.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 782.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 779.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 777.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 776.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 775.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 772.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 766.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 764.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 759.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 757.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 751.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 746.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 744.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 743.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 735.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 729.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 725.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 722.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 722.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 719.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 718.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 713.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 711.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 709.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 709.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 708.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 708.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 704.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 702.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 700.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 699.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 698.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 694.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 694.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 692.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 691.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 689.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 682.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 681.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 681.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 681.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 680.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 680.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 679.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 679.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 678.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 677.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 677.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 672.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 672.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 669.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 669.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 666.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 663.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 662.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 657.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 657.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 656.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 656.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 649.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 639.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 639.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 637.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 636.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 635.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 635.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 631.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 630.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 629.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 625.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 623.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 621.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 621.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 619.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 618.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 612.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 612.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 610.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 605.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 602.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 602.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 599.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 598.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 598.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 597.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 591.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 590.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 587.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 586.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 585.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 584.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 583.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 580.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 580.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 579.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 578.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 576.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 575.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 574.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 574.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 572.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 571.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 571.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 569.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 568.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 566.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 565.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 564.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 563.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 563.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 560.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 559.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 559.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 559.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 557.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 556.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 555.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 555.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 553.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 552.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 548.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 542.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 539.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 539.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 537.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 537.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 537.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 536.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 530.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 526.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 521.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 519.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 512.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 511.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 509.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 509.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 507.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 507.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 506.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 502.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 502.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 501.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 501.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 497.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 496.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 496.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 492.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 491.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 491.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 487.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 483.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 474.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 469.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 466.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 463.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 463.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 461.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 459.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 453.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 447.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 437.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 434.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 425.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 425.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 423.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 421.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 417.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 414.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 406.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 403.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 381.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 380.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 376.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 373.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 358.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 350.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 339.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 336.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 335.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 335.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 332.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 332.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 331.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 312.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 308.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 283.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 272.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 247.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 242.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 224.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 216.7
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 47.5
Samples: 4

Max nTPM: 59.4
Min nTPM: 33.5
Sample A Female 59.4
Sample B Female 33.5
Sample C Male 53.5
Sample D Male 43.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 36.4
Samples: 4

Max nTPM: 42.1
Min nTPM: 28.8
Sample A Male 38.5
Sample B Male 36.2
Sample C Female 28.8
Sample D Female 42.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
75695667 Antisense, RP_060518_04_D06, Mouse strain C57BL/6J (56 days, male) 0.2
77278967 Antisense, RP_070116_01_A03, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo