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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Low
Ovarian stroma cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2239.2 nTPM
HPA:1761.7 nTPM
GTEx:2239.2 nTPM
FANTOM5:107.0 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA000857
Ovarian stroma cells Low


OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1761.7
overview
Female, age 64
Ovary sample 192
nTPM: 1293.9
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 1738.4
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 1707.1
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 1176.5
N/A
Female, age 16
Ovary sample 3663
nTPM: 3381.1
N/A
Female, age 20
Ovary sample 3664
nTPM: 1864.1
N/A
Female, age 32
Ovary sample 3665
nTPM: 1170.6

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2239.2
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 2239.2
Samples: 193

Max nTPM: 5210.5
Min nTPM: 828.1
Std nTPM: 788.8
Median nTPM: 2068.8
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 5210.5
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 4756.5
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 4576.1
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 4387.4
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 4071.7
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 4036.8
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 4027.4
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 4023.7
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 3871.3
GTEX-183WM-1926-SM-72D5F 70-79 years, female 3712.5
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 3692.6
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 3690.3
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 3662.0
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 3659.5
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 3569.6
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 3547.9
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 3527.7
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 3513.4
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 3432.7
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 3403.5
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 3370.1
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 3302.3
GTEX-QVJO-3126-SM-COH22 60-69 years, female 3242.8
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 3240.8
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 3209.7
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 3147.3
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 3092.0
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 3088.7
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 3072.3
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 3024.7
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 3000.6
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 2991.7
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 2971.9
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 2971.0
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 2923.7
GTEX-RU72-2226-SM-46MUE 50-59 years, female 2917.9
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 2901.9
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 2853.5
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 2804.8
GTEX-15EOM-1526-SM-68723 20-29 years, female 2750.9
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 2747.3
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 2741.3
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 2666.8
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 2663.6
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 2658.8
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 2631.2
GTEX-13SLX-2426-SM-664OM 50-59 years, female 2627.2
GTEX-R45C-2526-SM-GRR28 60-69 years, female 2618.0
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 2616.1
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 2610.0
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 2609.0
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 2592.0
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 2571.7
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 2544.4
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 2543.8
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 2539.7
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 2525.5
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 2520.0
GTEX-14BIN-1426-SM-664NI 50-59 years, female 2508.0
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 2507.3
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 2470.9
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 2469.5
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 2468.7
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 2446.5
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 2374.9
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 2363.4
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 2350.4
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 2338.5
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 2338.2
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 2328.5
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 2325.7
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 2322.2
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 2321.5
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 2308.1
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 2286.1
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 2282.8
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 2281.2
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 2275.4
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 2256.2
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 2249.6
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 2200.3
GTEX-11I78-1926-SM-59878 50-59 years, female 2199.7
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 2185.0
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 2175.9
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 2170.6
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 2163.9
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 2159.8
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 2158.4
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 2153.5
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 2131.4
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 2118.2
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 2112.9
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 2081.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 2080.1
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 2073.0
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 2071.2
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 2068.8
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 2037.5
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 2034.2
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 2012.0
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 2011.9
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 2010.7
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 2009.5
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 2008.8
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 2002.2
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 1999.4
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 1992.8
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 1984.0
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 1981.4
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 1977.7
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 1971.4
GTEX-P78B-1926-SM-3P616 40-49 years, female 1970.8
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 1967.8
GTEX-S341-0726-SM-4AD5R 40-49 years, female 1958.8
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 1932.2
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 1930.6
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 1907.0
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 1900.1
GTEX-S32W-1226-SM-4AD67 50-59 years, female 1883.0
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 1873.3
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 1871.3
GTEX-14PKV-1226-SM-6871T 20-29 years, female 1858.7
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 1849.0
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 1848.0
GTEX-QCQG-1426-SM-48U22 50-59 years, female 1847.7
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 1843.6
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 1837.4
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 1831.3
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 1831.3
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 1827.9
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 1818.0
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 1816.5
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 1810.5
GTEX-18D9A-0826-SM-718C1 30-39 years, female 1802.5
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 1800.5
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 1792.2
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 1786.0
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 1772.3
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 1766.9
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 1763.9
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 1762.3
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 1754.3
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 1737.1
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 1735.0
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 1723.3
GTEX-145ME-1226-SM-5MR87 40-49 years, female 1721.1
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 1717.4
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 1714.2
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 1700.5
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 1695.4
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 1684.4
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 1669.4
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 1658.5
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 1635.8
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 1631.5
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 1619.9
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 1617.8
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 1600.5
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 1593.3
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 1527.4
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 1524.1
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 1502.5
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 1491.5
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 1489.6
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 1473.7
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 1465.7
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 1437.5
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 1429.7
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 1405.3
GTEX-Q734-0726-SM-48TZP 40-49 years, female 1377.3
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 1367.1
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 1359.5
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 1356.6
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 1325.6
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 1324.0
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 1313.0
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 1305.8
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 1297.4
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 1294.0
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 1278.5
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 1262.8
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 1243.8
GTEX-14JG6-0626-SM-68716 30-39 years, female 1241.6
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 1236.9
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1222.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1190.2
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 1184.5
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 1169.9
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1093.7
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1037.3
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 985.6
GTEX-R55G-1526-SM-48FER 40-49 years, female 960.8
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 828.1
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OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

107.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 107.0
FF:10020-101D2 47,75,84 years, female 107.0

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