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  • TISSUE

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  • LPAR1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:93.5 nTPM
HPA Brain:194.3 nTPM
GTEx:93.5 nTPM
Pig:38.1 nTPM
Mouse:34.4 nTPM
Allen mouse:0.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 31.1
2226 Male, age 75, left hemisphere 42.4
1961 Female, age 42, unknown 19.8
Dorsomedial nucleus
nTPM: 72.4
2017 Female, age 42, unknown 118.6
1989 Male, age 62, unknown 70.5
2041 Female, age 72, unknown 28.1
Lateral hypothalamic area
nTPM: 106.4
2412 Male, age 62, unknown 155.9
2228 Male, age 66, unknown 104.6
2271 Male, age 75, both hemispheres 91.0
1791 Male, age 80, right hemisphere 74.0
Mammillary body
nTPM: 192.1
1945 Male, age 80, right hemisphere 247.2
1948 Female, age 72, unknown 223.2
1834 Female, age 42, unknown 192.2
2413 Male, age 66, unknown 151.0
1923 Female, age 72, unknown 147.2
Paraventricular nucleus
nTPM: 194.3
2700 Male, age 62, unknown 194.3
Preoptic area
nTPM: 145.9
2414 Female, age 72, unknown 246.5
1861 Female, age 42, unknown 155.9
1907 Male, age 80, right hemisphere 35.2
Supraoptic nucleus
nTPM: 94.2
2043 Male, age 62, unknown 104.4
2835 Female, age 72, unknown 98.7
1894 Female, age 72, unknown 79.4
Ventromedial nucleus
nTPM: 26.0
1982 Female, age 72, unknown 28.5
1822 Female, age 42, unknown 23.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 93.5
Samples: 257

Max nTPM: 856.8
Min nTPM: 1.9
Std nTPM: 112.1
Median nTPM: 55.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 856.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 760.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 598.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 544.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 483.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 433.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 410.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 390.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 356.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 345.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 331.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 272.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 260.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 257.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 257.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 256.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 249.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 248.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 247.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 247.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 233.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 229.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 229.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 228.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 228.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 224.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 214.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 197.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 189.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 188.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 187.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 185.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 184.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 183.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 182.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 180.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 173.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 170.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 164.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 163.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 160.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 159.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 159.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 159.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 155.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 155.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 152.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 150.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 133.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 133.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 133.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 129.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 129.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 126.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 126.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 126.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 125.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 122.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 121.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 121.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 121.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 120.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 119.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 118.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 117.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 117.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 117.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 116.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 115.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 113.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 109.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 108.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 102.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 100.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 100.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 100.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 100.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 99.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 99.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 98.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 97.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 95.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 92.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 92.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 90.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 89.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 86.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 85.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 84.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 84.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 83.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 83.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 83.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 82.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 82.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 81.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 80.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 80.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 80.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 79.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 79.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 79.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 77.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 77.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 74.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 73.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 72.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 71.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 71.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 69.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 68.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 67.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 65.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 64.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 63.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 62.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 62.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 62.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 62.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 58.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 57.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 57.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 56.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 56.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 56.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 56.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 55.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 55.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 55.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 54.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 53.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 53.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 53.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 52.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 52.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 52.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 52.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 52.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 51.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 51.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 50.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 48.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 47.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 46.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 46.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 46.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 45.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 44.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 44.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 44.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 44.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 43.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 43.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 42.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 41.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 41.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 41.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 41.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 41.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 41.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 40.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 39.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 39.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 39.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 39.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 38.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 37.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 35.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 35.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 35.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 34.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 34.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 34.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 33.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 33.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 33.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 33.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 33.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 32.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 32.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 32.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 32.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 31.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 31.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 31.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 30.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 30.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 30.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 29.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 28.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 28.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 28.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 27.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 26.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 26.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 26.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 26.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 26.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 25.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 24.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 24.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 24.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 23.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 23.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 23.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 23.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 23.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 22.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 22.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 21.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 21.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 21.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 21.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 21.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 21.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 20.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 20.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 20.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 20.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 19.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 19.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 19.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 18.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 18.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 18.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 17.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 17.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 17.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 17.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 16.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 16.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 16.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 15.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 15.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 15.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 14.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 13.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 13.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 13.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 13.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 13.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 12.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 11.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 11.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 11.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 11.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 10.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 10.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 10.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 9.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 9.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 9.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 9.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 9.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 4.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 2.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 1.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 38.1
Samples: 4

Max nTPM: 45.6
Min nTPM: 24.0
Sample A Female 45.6
Sample B Female 41.8
Sample C Male 40.9
Sample D Male 24.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 34.4
Samples: 4

Max nTPM: 40.8
Min nTPM: 26.6
Sample A Male 26.6
Sample B Male 30.5
Sample C Female 40.8
Sample D Female 39.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.7
75749420 Antisense, RP_060518_04_E04, Mouse strain C57BL/6J (56 days, male) 0.8
79556595 Antisense, RP_071018_01_G09, Mouse strain C57BL/6J (56 days, male) 0.7
79360278 Antisense, RP_071018_01_G09, Mouse strain C57BL/6J (56 days, male) 0.6

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