We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SFT2D1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SFT2D1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:47.4 nTPM
HPA Brain:30.4 nTPM
GTEx:47.4 nTPM
Pig:53.8 nTPM
Mouse:18.4 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 14.1
2226 Male, age 75, left hemisphere 17.6
1961 Female, age 42, unknown 10.7
Dorsomedial nucleus
nTPM: 15.1
2017 Female, age 42, unknown 16.9
1989 Male, age 62, unknown 14.7
2041 Female, age 72, unknown 13.7
Lateral hypothalamic area
nTPM: 19.9
2271 Male, age 75, both hemispheres 23.7
2228 Male, age 66, unknown 22.2
1791 Male, age 80, right hemisphere 21.1
2412 Male, age 62, unknown 12.5
Mammillary body
nTPM: 30.4
1945 Male, age 80, right hemisphere 34.9
1948 Female, age 72, unknown 31.0
1834 Female, age 42, unknown 30.0
1923 Female, age 72, unknown 28.9
2413 Male, age 66, unknown 27.3
Paraventricular nucleus
nTPM: 16.0
2700 Male, age 62, unknown 16.0
Preoptic area
nTPM: 19.0
2414 Female, age 72, unknown 23.5
1861 Female, age 42, unknown 17.6
1907 Male, age 80, right hemisphere 15.7
Supraoptic nucleus
nTPM: 23.7
1894 Female, age 72, unknown 32.0
2043 Male, age 62, unknown 26.6
2835 Female, age 72, unknown 12.7
Ventromedial nucleus
nTPM: 13.3
1982 Female, age 72, unknown 13.7
1822 Female, age 42, unknown 12.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 47.4
Samples: 257

Max nTPM: 119.0
Min nTPM: 22.3
Std nTPM: 15.9
Median nTPM: 43.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 119.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 110.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 104.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 102.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 97.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 92.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 88.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 87.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 82.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 82.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 80.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 79.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 78.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 76.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 76.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 76.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 73.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 73.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 72.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 72.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 71.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 71.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 71.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 71.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 71.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 70.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 70.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 69.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 66.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 66.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 66.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 66.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 65.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 64.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 64.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 64.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 63.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 63.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 63.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 63.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 62.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 61.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 61.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 60.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 60.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 60.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 59.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 59.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 59.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 58.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 58.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 57.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 57.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 57.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 56.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 56.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 56.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 55.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 55.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 54.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 54.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 54.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 54.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 53.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 53.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 53.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 52.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 52.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 52.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 52.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 52.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 52.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 52.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 52.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 51.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 51.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 51.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 51.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 51.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 51.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 51.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 50.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 50.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 50.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 50.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 50.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 49.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 49.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 48.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 48.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 48.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 48.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 48.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 48.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 47.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 47.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 47.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 47.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 47.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 47.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 47.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 46.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 46.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 46.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 46.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 46.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 46.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 46.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 45.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 45.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 45.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 45.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 45.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 45.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 45.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 45.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 45.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 45.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 44.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 44.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 44.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 44.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 44.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 44.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 43.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 43.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 43.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 43.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 43.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 43.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 43.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 43.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 43.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 43.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 43.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 43.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 42.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 42.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 42.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 42.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 42.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 42.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 42.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 42.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 42.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 42.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 42.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 41.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 41.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 41.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 41.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 41.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 40.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 40.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 40.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 40.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 40.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 40.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 40.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 40.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 39.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 39.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 39.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 39.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 39.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 39.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 39.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 39.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 39.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 39.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 39.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 39.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 38.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 38.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 38.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 38.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 38.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 38.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 38.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 37.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 37.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 37.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 37.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 37.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 36.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 36.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 36.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 36.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 36.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 36.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 36.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 36.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 36.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 36.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 35.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 35.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 35.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 35.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 35.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 35.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 35.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 35.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 35.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 34.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 34.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 34.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 34.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 34.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 34.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 34.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 34.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 34.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 34.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 33.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 33.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 33.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 33.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 33.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 33.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 33.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 32.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 32.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 32.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 32.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 32.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 32.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 32.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 32.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 31.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 31.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 31.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 31.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 31.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 30.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 30.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 30.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 30.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 30.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 30.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 30.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 29.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 29.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 29.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 29.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 28.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 28.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 28.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 28.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 28.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 27.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 26.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 26.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 26.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 25.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 25.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 22.3
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 53.9
Samples: 4

Max nTPM: 68.7
Min nTPM: 34.3
Sample A Female 68.7
Sample B Female 59.9
Sample C Male 52.5
Sample D Male 34.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 18.4
Samples: 4

Max nTPM: 21.6
Min nTPM: 14.7
Sample A Male 20.0
Sample B Male 21.6
Sample C Female 14.7
Sample D Female 17.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo