HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:1077.1 nTPM
HPA Brain:207.4 nTPM
GTEx:1077.1 nTPM
FANTOM5:29.0 Scaled Tags Per Million
Pig:1.7 nTPM
Mouse:325.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047105
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 207.4
Sample id Sample description nTPM
Hippocampus
nTPM: 202.9
1898 Male, age 80, left hemisphere 278.8
1911 Female, age 85, right hemisphere 218.8
2529 Female, age 94, left hemisphere 199.4
1855 Male, age 76, left hemisphere 182.8
2621 Female, age 67, right hemisphere 177.5
2148 Female, age 91, left hemisphere 160.3
Dentate gyrus
nTPM: 194.7
2010 Male, age 76, both hemispheres 256.7
2530 Female, age 94, left hemisphere 227.1
1927 Female, age 91, both hemispheres 179.0
2246 Female, age 85, both hemispheres 170.9
2531 Female, age 67, both hemispheres 168.5
2528 Male, age 74, both hemispheres 165.8
Entorhinal gyrus
nTPM: 188.3
2686 Male, age 75, right hemisphere 256.4
1787 Male, age 76, left hemisphere 201.9
2117 Female, age 91, right hemisphere 195.5
1938 Female, age 85, left hemisphere 188.5
2764 Male, age 80, right hemisphere 151.7
2613 Female, age 94, left hemisphere 135.8
Hippocampus, CA1
nTPM: 198.5
2045 Male, age 76, both hemispheres 236.2
2749 Male, age 80, left hemisphere 206.3
2082 Female, age 91, right hemisphere 201.3
1873 Female, age 85, both hemispheres 184.9
2527 Male, age 74, both hemispheres 163.9
Hippocampus, CA2
nTPM: 207.4
1963 Male, age 80, left hemisphere 243.7
1892 Male, age 76, both hemispheres 242.3
1940 Female, age 85, left hemisphere 206.7
2249 Male, age 74, both hemispheres 197.0
2437 Female, age 94, left hemisphere 181.7
2113 Female, age 91, right hemisphere 172.9
Hippocampus, CA3
nTPM: 180.8
1867 Male, age 76, both hemispheres 276.6
1891 Female, age 85, both hemispheres 238.0
2137 Male, age 80, left hemisphere 163.0
2861 Female, age 67, both hemispheres 146.1
2436 Male, age 74, both hemispheres 141.9
2620 Female, age 94, left hemisphere 119.0
Parahippocampal cortex
nTPM: 176.0
2018 Male, age 76, both hemispheres 301.3
1850 Male, age 80, both hemispheres 195.1
2250 Female, age 67, right hemisphere 192.6
1990 Female, age 91, right hemisphere 185.5
1933 Female, age 85, both hemispheres 164.1
2692 Male, age 74, both hemispheres 161.0
2532 Female, age 72, left hemisphere 157.3
2245 Female, age 91, both hemispheres 146.1
2693 Female, age 94, both hemispheres 144.3
2622 Female, age 67, right hemisphere 112.7
Perirhinal gyrus
nTPM: 182.5
1847 Female, age 91, left hemisphere 215.8
1841 Female, age 85, right hemisphere 204.8
2848 Male, age 76, right hemisphere 177.5
1794 Male, age 80, right hemisphere 172.3
2521 Female, age 94, right hemisphere 141.9
Subiculum
nTPM: 203.5
2042 Male, age 76, both hemispheres 290.1
1901 Male, age 80, both hemispheres 225.7
1977 Female, age 85, both hemispheres 222.1
2729 Female, age 91, right hemisphere 195.9
2438 Female, age 94, left hemisphere 153.3
2619 Male, age 74, both hemispheres 133.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1077.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1077.1
Samples: 255

Max nTPM: 3067.8
Min nTPM: 404.9
Std nTPM: 396.6
Median nTPM: 1003.0
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 3067.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3060.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2772.2
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 2305.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2197.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2155.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2058.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1945.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1942.1
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 1916.1
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 1907.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 29.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.0
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1.7
Pig sample Sample description nTPM
Subiculum
nTPM: 0.4
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 1.4
Sample C Male 0.0
Sample D Male 0.0
Dorsal hippocampus
nTPM: 0.4
Samples: 4

Max nTPM: 1.5
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 1.5
Sample D Male 0.0
Entorhinal cortex
nTPM: 1.7
Samples: 4

Max nTPM: 5.4
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 1.5
Sample C Male 0.0
Sample D Male 5.4
Ventral hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 325.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 318.4
Samples: 4

Max nTPM: 345.2
Min nTPM: 298.6
Sample A Male 298.6
Sample B Male 325.2
Sample C Female 345.2
Sample D Female 304.6
Hippocampal formation
nTPM: 325.3
Samples: 4

Max nTPM: 405.3
Min nTPM: 294.3
Sample A Male 405.3
Sample B Male 294.5
Sample C Female 294.3
Sample D Female 306.9

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