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FAM229B
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  • TISSUE

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  • FAM229B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:69.9 nTPM
HPA Brain:57.1 nTPM
GTEx:69.9 nTPM
Pig:2.6 nTPM
Mouse:23.1 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 40.5
2226 Male, age 75, left hemisphere 41.8
1961 Female, age 42, unknown 39.1
Dorsomedial nucleus
nTPM: 44.1
2041 Female, age 72, unknown 55.2
1989 Male, age 62, unknown 39.8
2017 Female, age 42, unknown 37.3
Lateral hypothalamic area
nTPM: 44.4
1791 Male, age 80, right hemisphere 56.6
2271 Male, age 75, both hemispheres 41.8
2412 Male, age 62, unknown 40.0
2228 Male, age 66, unknown 39.1
Mammillary body
nTPM: 50.9
1923 Female, age 72, unknown 55.8
1945 Male, age 80, right hemisphere 53.3
1948 Female, age 72, unknown 52.7
1834 Female, age 42, unknown 50.6
2413 Male, age 66, unknown 42.3
Paraventricular nucleus
nTPM: 43.9
2700 Male, age 62, unknown 43.9
Preoptic area
nTPM: 45.6
1907 Male, age 80, right hemisphere 49.5
2414 Female, age 72, unknown 46.5
1861 Female, age 42, unknown 40.7
Supraoptic nucleus
nTPM: 57.1
1894 Female, age 72, unknown 68.3
2043 Male, age 62, unknown 63.5
2835 Female, age 72, unknown 39.5
Ventromedial nucleus
nTPM: 40.9
1982 Female, age 72, unknown 42.0
1822 Female, age 42, unknown 39.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 69.9
Samples: 257

Max nTPM: 169.0
Min nTPM: 38.9
Std nTPM: 18.0
Median nTPM: 67.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 169.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 160.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 135.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 133.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 125.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 122.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 116.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 115.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 111.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 111.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 107.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 106.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 106.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 104.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 104.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 100.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 98.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 96.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 96.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 96.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 92.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 91.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 90.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 90.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 89.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 89.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 89.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 89.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 87.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 87.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 86.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 85.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 83.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 83.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 83.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 83.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 83.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 83.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 82.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 82.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 82.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 81.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 81.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 81.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 80.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 80.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 80.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 80.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 79.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 79.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 79.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 79.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 79.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 79.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 78.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 78.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 78.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 78.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 77.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 77.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 77.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 77.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 77.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 77.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 76.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 76.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 75.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 75.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 75.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 75.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 75.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 75.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 75.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 74.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 74.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 74.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 74.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 74.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 74.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 73.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 73.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 73.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 73.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 73.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 73.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 73.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 73.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 73.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 73.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 72.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 72.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 72.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 72.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 72.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 71.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 71.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 71.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 71.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 71.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 71.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 71.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 71.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 70.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 70.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 70.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 70.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 70.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 70.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 69.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 69.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 69.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 69.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 69.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 69.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 69.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 69.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 68.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 68.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 68.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 68.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 68.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 68.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 68.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 68.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 68.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 68.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 67.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 67.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 67.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 67.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 67.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 67.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 66.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 66.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 66.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 66.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 65.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 65.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 65.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 65.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 65.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 65.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 65.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 65.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 64.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 64.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 64.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 64.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 64.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 64.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 64.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 64.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 63.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 63.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 63.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 63.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 63.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 63.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 63.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 63.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 63.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 63.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 62.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 62.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 62.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 61.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 61.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 61.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 61.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 61.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 61.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 61.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 61.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 61.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 60.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 60.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 60.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 60.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 60.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 60.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 60.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 59.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 59.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 59.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 59.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 59.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 59.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 59.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 58.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 58.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 58.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 58.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 58.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 58.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 58.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 58.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 58.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 58.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 57.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 57.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 57.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 57.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 57.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 57.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 57.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 57.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 56.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 56.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 56.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 56.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 56.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 56.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 55.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 55.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 55.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 55.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 55.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 55.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 55.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 54.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 54.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 53.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 53.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 52.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 52.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 52.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 52.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 52.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 52.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 52.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 51.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 51.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 51.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 50.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 50.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 49.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 49.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 49.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 49.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 49.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 49.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 48.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 48.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 47.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 47.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 47.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 47.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 47.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 46.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 46.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 46.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 46.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 46.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 45.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 43.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 40.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 38.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 2.6
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.3
Sample A Female 2.4
Sample B Female 2.8
Sample C Male 3.0
Sample D Male 2.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 23.1
Samples: 4

Max nTPM: 26.4
Min nTPM: 20.2
Sample A Male 20.2
Sample B Male 22.1
Sample C Female 23.5
Sample D Female 26.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
71919505 Antisense, RP_051012_02_E09, Mouse strain C57BL/6J (56 days, male) 0.0

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