A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
66.0
nTPM
Monaco:
70.2
nTPM
Schmiedel:
75.7
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
66.0
HPA sample
nTPM
Classical monocyte nTPM: 45.8
Samples: 6
Max nTPM: 79.7
Min nTPM: 31.2
P10809_1003
47.6
P10809_1020
79.7
P10809_1039
47.4
P10809_1058
31.2
P10809_1080
31.9
P10809_1107
37.2
Intermediate monocyte nTPM: 66.0
Samples: 6
Max nTPM: 104.9
Min nTPM: 29.8
P10809_1004
70.0
P10809_1023
104.9
P10809_1042
68.9
P10809_1061
29.8
P10809_1081
57.0
P10809_1108
65.3
Non-classical monocyte nTPM: 46.9
Samples: 5
Max nTPM: 62.6
Min nTPM: 29.5
P10809_1005
62.6
P10809_1053
52.1
P10809_1072
29.5
P10809_1082
47.1
P10809_1109
43.3
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
70.2
Monaco sample
nTPM
Classical monocyte nTPM: 48.4
Samples: 4
Max nTPM: 61.6
Min nTPM: 33.4
RHH5313_R3680
52.4
RHH5221_R3593
33.4
RHH5250_R3622
61.6
RHH5279_R3651
46.2
Intermediate monocyte nTPM: 70.2
Samples: 4
Max nTPM: 103.6
Min nTPM: 43.1
RHH5314_R3681
103.6
RHH5222_R3594
43.1
RHH5251_R3623
46.3
RHH5280_R3652
87.7
Non-classical monocyte nTPM: 52.3
Samples: 4
Max nTPM: 63.2
Min nTPM: 42.5
RHH5315_R3682
59.6
RHH5223_R3595
43.8
RHH5252_R3624
42.5
RHH5281_R3653
63.2
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
75.7
Schmiedel sample id
TPM
Classical monocyte TPM: 59.0
Samples: 91
Max TPM: 82.3
Min TPM: 45.2
MONOCYTES_1
82.3
MONOCYTES_2
71.4
MONOCYTES_3
71.2
MONOCYTES_4
70.9
MONOCYTES_5
70.3
MONOCYTES_6
70.1
MONOCYTES_7
69.7
MONOCYTES_8
69.2
MONOCYTES_9
68.7
MONOCYTES_10
67.9
MONOCYTES_11
67.7
MONOCYTES_12
67.0
MONOCYTES_13
66.4
MONOCYTES_14
65.9
MONOCYTES_15
65.8
MONOCYTES_16
65.4
MONOCYTES_17
65.2
MONOCYTES_18
65.1
MONOCYTES_19
65.0
MONOCYTES_20
64.4
MONOCYTES_21
64.1
MONOCYTES_22
63.5
MONOCYTES_23
63.3
MONOCYTES_24
63.2
MONOCYTES_25
63.2
MONOCYTES_26
63.1
MONOCYTES_27
62.9
MONOCYTES_28
62.6
MONOCYTES_29
62.4
MONOCYTES_30
61.7
MONOCYTES_31
61.6
MONOCYTES_32
61.5
MONOCYTES_33
61.4
MONOCYTES_34
60.7
MONOCYTES_35
60.7
MONOCYTES_36
60.4
MONOCYTES_37
60.3
MONOCYTES_38
60.2
MONOCYTES_39
60.0
MONOCYTES_40
59.9
MONOCYTES_41
59.1
MONOCYTES_42
58.9
MONOCYTES_43
58.8
MONOCYTES_44
58.6
MONOCYTES_45
58.4
MONOCYTES_46
58.3
MONOCYTES_47
58.1
MONOCYTES_48
57.7
MONOCYTES_49
57.4
MONOCYTES_50
57.3
MONOCYTES_51
57.3
MONOCYTES_52
57.2
MONOCYTES_53
56.9
MONOCYTES_54
56.8
MONOCYTES_55
56.6
MONOCYTES_56
56.5
MONOCYTES_57
56.4
MONOCYTES_58
56.1
MONOCYTES_59
55.7
MONOCYTES_60
55.3
MONOCYTES_61
55.3
MONOCYTES_62
55.3
MONOCYTES_63
55.3
MONOCYTES_64
55.0
MONOCYTES_65
54.9
MONOCYTES_66
54.8
MONOCYTES_67
54.7
MONOCYTES_68
54.6
MONOCYTES_69
54.5
MONOCYTES_70
54.1
MONOCYTES_71
54.1
MONOCYTES_72
54.0
MONOCYTES_73
53.8
MONOCYTES_74
53.8
MONOCYTES_75
53.4
MONOCYTES_76
53.3
MONOCYTES_77
53.1
MONOCYTES_78
52.5
MONOCYTES_79
52.3
MONOCYTES_80
51.7
MONOCYTES_81
51.6
MONOCYTES_82
50.7
MONOCYTES_83
50.4
MONOCYTES_84
50.1
MONOCYTES_85
50.1
MONOCYTES_86
48.0
MONOCYTES_87
47.8
MONOCYTES_88
47.1
MONOCYTES_89
46.6
MONOCYTES_90
45.4
MONOCYTES_91
45.2
Show allShow less
Non-classical monocyte TPM: 75.7
Samples: 90
Max TPM: 110.5
Min TPM: 51.5
M2_1
110.5
M2_2
101.9
M2_3
100.0
M2_4
94.7
M2_5
93.4
M2_6
93.4
M2_7
92.0
M2_8
91.0
M2_9
90.5
M2_10
90.2
M2_11
88.1
M2_12
87.0
M2_13
87.0
M2_14
86.8
M2_15
86.7
M2_16
85.4
M2_17
85.2
M2_18
84.6
M2_19
83.8
M2_20
83.4
M2_21
83.2
M2_22
83.1
M2_23
83.0
M2_24
82.2
M2_25
81.4
M2_26
80.9
M2_27
80.1
M2_28
79.7
M2_29
79.5
M2_30
78.8
M2_31
78.8
M2_32
78.8
M2_33
78.7
M2_34
78.5
M2_35
78.5
M2_36
78.0
M2_37
77.5
M2_38
75.9
M2_39
75.5
M2_40
75.1
M2_41
74.7
M2_42
74.6
M2_43
74.4
M2_44
74.3
M2_45
74.2
M2_46
74.0
M2_47
73.9
M2_48
73.8
M2_49
73.6
M2_50
73.5
M2_51
73.4
M2_52
73.4
M2_53
73.0
M2_54
72.9
M2_55
72.7
M2_56
72.7
M2_57
72.3
M2_58
71.5
M2_59
71.5
M2_60
71.1
M2_61
70.9
M2_62
70.5
M2_63
70.3
M2_64
69.5
M2_65
69.5
M2_66
68.8
M2_67
68.7
M2_68
68.6
M2_69
68.4
M2_70
68.4
M2_71
67.5
M2_72
67.3
M2_73
66.6
M2_74
66.2
M2_75
66.0
M2_76
65.9
M2_77
65.2
M2_78
64.8
M2_79
63.7
M2_80
63.4
M2_81
63.4
M2_82
62.5
M2_83
62.3
M2_84
60.9
M2_85
60.6
M2_86
60.5
M2_87
60.1
M2_88
58.6
M2_89
53.1
M2_90
51.5
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
