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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • TMSB4X
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN67 EYE3 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM8 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD WHITE MATTER
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:1435.1 nTPM
GTEx:3480.2 nTPM
FANTOM5:25.1 Scaled Tags Per Million
Macaque:2.6 nTPM
Pig:1493.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1435.1
Sample id Sample description nTPM
Putamen
nTPM: 1435.1
2466 Female, age 79, unknown 1626.8
1829 Male, age 74, unknown 1556.6
2482 Female, age 94, left hemisphere 1442.5
2647 Male, age 75, left hemisphere 1406.2
1838 Male, age 80, right hemisphere 1365.7
1937 Female, age 91, right hemisphere 1341.2
2489 Female, age 72, unknown 1307.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3480.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 3480.2
Samples: 254

Max nTPM: 10208.8
Min nTPM: 1719.7
Std nTPM: 1165.0
Median nTPM: 3193.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 10208.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 9277.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 7953.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 7814.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 7536.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 7057.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 6569.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 6537.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 6490.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 6153.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5980.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 5965.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 5665.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5520.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 5516.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 5494.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 5440.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 5344.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5218.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5173.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 5125.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5025.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 4961.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 4959.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 4922.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 4887.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 4817.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 4761.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 4707.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 4581.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 4575.9
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 4558.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 4457.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 4444.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 4404.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 4377.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 4240.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 4227.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 4182.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 4173.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 4163.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 4154.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 4146.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 4125.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 4117.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 4090.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 4055.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 4023.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 4022.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 4004.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 4003.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 3997.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 3995.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 3991.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 3977.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 3939.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 3939.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 3922.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 3920.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 3919.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 3890.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 3861.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3850.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 3835.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 3830.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 3828.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 3817.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 3814.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 3782.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 3760.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 3759.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 3751.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 3706.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 3660.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 3648.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 3645.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 3642.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 3627.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 3622.1
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 3615.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 3614.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 3591.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 3555.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 3548.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 3537.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 3527.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 3523.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 3512.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 3503.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 3491.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 3484.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 3480.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 3458.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 3445.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 3437.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 3435.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 3431.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 3426.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 3417.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 3415.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 3409.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 3372.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 3362.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 3358.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 3354.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 3350.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 3346.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 3341.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 3334.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 3332.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 3320.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 3300.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 3296.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 3274.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 3266.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 3263.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 3256.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 3254.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 3246.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 3244.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 3244.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 3239.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 3210.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 3210.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 3204.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 3204.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 3193.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 3193.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 3147.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 3142.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 3139.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 3137.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 3136.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 3134.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 3130.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 3114.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 3088.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 3083.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 3071.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 3069.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 3069.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 3065.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 3064.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 3064.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 3055.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 3050.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 3044.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 3042.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 3039.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 3028.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 3025.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 3023.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 3018.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 3009.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 3008.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 3006.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 3005.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 2987.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 2985.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 2974.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 2966.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 2957.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 2950.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 2946.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 2944.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2943.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 2940.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 2911.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 2906.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 2899.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 2884.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 2882.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2877.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 2875.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 2870.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 2858.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 2856.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 2850.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 2841.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 2840.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 2835.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 2835.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 2834.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 2832.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 2829.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 2826.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 2824.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 2822.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 2822.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 2820.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 2812.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 2805.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 2789.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 2789.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 2761.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 2760.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 2756.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 2751.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 2743.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 2743.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 2741.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 2721.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 2712.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 2709.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 2697.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 2684.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 2679.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 2673.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 2639.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 2630.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 2620.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 2604.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 2598.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 2575.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 2561.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 2555.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 2552.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 2537.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 2526.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 2524.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2520.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 2519.4
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 2519.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 2517.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 2488.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 2486.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 2483.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 2477.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 2454.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 2426.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 2424.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 2402.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 2399.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 2393.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 2389.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 2389.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 2375.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 2370.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 2360.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 2358.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 2344.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 2338.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 2334.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 2316.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 2216.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 2207.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 2178.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 2176.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 2164.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 2108.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 2101.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 2053.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 1847.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 1719.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

25.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 25.1
FF:10176-103C5 60 years, female 25.1

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.6
Macaque sample Sample description nTPM
Putamen
nTPM: 2.6
Samples: 2

Max nTPM: 5.2
Min nTPM: 0.0
Sample A 5.2
Sample B 0.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1493.9
Pig sample Sample description nTPM
Putamen
nTPM: 1493.9
Samples: 3

Max nTPM: 1760.5
Min nTPM: 1299.4
Sample B Female 1421.7
Sample C Male 1760.5
Sample D Male 1299.4

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