HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:1718.4 nTPM
HPA Brain:388.1 nTPM
GTEx:1718.4 nTPM
FANTOM5:69.2 Scaled Tags Per Million
Mouse:0.2 nTPM
Allen mouse:3.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050159
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 388.1
Sample id Sample description nTPM
Hippocampus
nTPM: 388.1
1898 Male, age 80, left hemisphere 477.8
2529 Female, age 94, left hemisphere 440.0
1911 Female, age 85, right hemisphere 370.5
2621 Female, age 67, right hemisphere 370.0
2148 Female, age 91, left hemisphere 340.4
1855 Male, age 76, left hemisphere 330.2
Dentate gyrus
nTPM: 352.1
2530 Female, age 94, left hemisphere 474.7
2010 Male, age 76, both hemispheres 382.8
2531 Female, age 67, both hemispheres 348.7
2246 Female, age 85, both hemispheres 319.8
1927 Female, age 91, both hemispheres 303.5
2528 Male, age 74, both hemispheres 282.9
Entorhinal gyrus
nTPM: 352.4
2686 Male, age 75, right hemisphere 438.2
2117 Female, age 91, right hemisphere 394.1
1787 Male, age 76, left hemisphere 349.9
1938 Female, age 85, left hemisphere 338.8
2764 Male, age 80, right hemisphere 320.4
2613 Female, age 94, left hemisphere 272.9
Hippocampus, CA1
nTPM: 334.9
2082 Female, age 91, right hemisphere 368.7
1873 Female, age 85, both hemispheres 357.9
2045 Male, age 76, both hemispheres 334.9
2527 Male, age 74, both hemispheres 320.5
2749 Male, age 80, left hemisphere 292.7
Hippocampus, CA2
nTPM: 348.5
1963 Male, age 80, left hemisphere 401.2
2437 Female, age 94, left hemisphere 355.7
1940 Female, age 85, left hemisphere 353.8
2113 Female, age 91, right hemisphere 350.3
1892 Male, age 76, both hemispheres 346.6
2249 Male, age 74, both hemispheres 283.6
Hippocampus, CA3
nTPM: 324.4
1891 Female, age 85, both hemispheres 395.4
1867 Male, age 76, both hemispheres 392.9
2861 Female, age 67, both hemispheres 379.4
2137 Male, age 80, left hemisphere 292.6
2436 Male, age 74, both hemispheres 249.1
2620 Female, age 94, left hemisphere 237.1
Parahippocampal cortex
nTPM: 330.8
2018 Male, age 76, both hemispheres 463.8
2250 Female, age 67, right hemisphere 376.1
1850 Male, age 80, both hemispheres 345.4
2245 Female, age 91, both hemispheres 331.2
2532 Female, age 72, left hemisphere 329.1
1933 Female, age 85, both hemispheres 327.5
1990 Female, age 91, right hemisphere 325.3
2692 Male, age 74, both hemispheres 291.8
2622 Female, age 67, right hemisphere 285.8
2693 Female, age 94, both hemispheres 232.1
Perirhinal gyrus
nTPM: 333.7
1841 Female, age 85, right hemisphere 386.8
1847 Female, age 91, left hemisphere 361.8
1794 Male, age 80, right hemisphere 327.4
2848 Male, age 76, right hemisphere 297.2
2521 Female, age 94, right hemisphere 295.1
Subiculum
nTPM: 352.0
2042 Male, age 76, both hemispheres 415.5
1977 Female, age 85, both hemispheres 401.2
1901 Male, age 80, both hemispheres 356.6
2729 Female, age 91, right hemisphere 319.8
2438 Female, age 94, left hemisphere 318.9
2619 Male, age 74, both hemispheres 300.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1718.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1718.4
Samples: 255

Max nTPM: 4474.1
Min nTPM: 687.3
Std nTPM: 625.2
Median nTPM: 1600.3
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 4474.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 4409.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 4030.9
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 3660.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 3601.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 3301.8
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 3208.4
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 3103.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2980.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2945.8
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 2926.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 69.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.2
FF:10153-102I9 76 years, female 87.6
FF:10169-103B7 60 years, female 50.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.0
Sample A Male 0.2
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.5
Hippocampal formation
nTPM: 0.2
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.5
Sample D Female 0.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
69873283 Antisense, RP_050510_04_H10, Mouse strain C57BL/6J (56 days, male) 3.8

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