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  • PCDHGC3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:203.0 nTPM
HPA Brain:172.9 nTPM
GTEx:203.0 nTPM
Mouse:45.8 nTPM
Allen mouse:9.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 138.3
1961 Female, age 42, unknown 153.8
2226 Male, age 75, left hemisphere 122.7
Dorsomedial nucleus
nTPM: 171.6
1989 Male, age 62, unknown 222.1
2017 Female, age 42, unknown 160.2
2041 Female, age 72, unknown 132.6
Lateral hypothalamic area
nTPM: 124.1
1791 Male, age 80, right hemisphere 171.1
2412 Male, age 62, unknown 157.0
2271 Male, age 75, both hemispheres 108.7
2228 Male, age 66, unknown 59.7
Mammillary body
nTPM: 153.7
1834 Female, age 42, unknown 185.6
1945 Male, age 80, right hemisphere 183.7
2413 Male, age 66, unknown 146.3
1948 Female, age 72, unknown 126.7
1923 Female, age 72, unknown 126.2
Paraventricular nucleus
nTPM: 136.7
2700 Male, age 62, unknown 136.7
Preoptic area
nTPM: 161.5
1861 Female, age 42, unknown 207.3
2414 Female, age 72, unknown 149.3
1907 Male, age 80, right hemisphere 128.0
Supraoptic nucleus
nTPM: 172.9
2043 Male, age 62, unknown 200.5
2835 Female, age 72, unknown 167.9
1894 Female, age 72, unknown 150.4
Ventromedial nucleus
nTPM: 152.2
1822 Female, age 42, unknown 165.8
1982 Female, age 72, unknown 138.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

203.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 203.0
Samples: 257

Max nTPM: 447.4
Min nTPM: 72.6
Std nTPM: 64.3
Median nTPM: 195.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 447.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 416.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 388.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 368.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 360.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 348.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 339.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 330.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 326.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 323.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 323.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 322.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 319.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 318.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 318.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 317.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 309.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 308.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 308.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 304.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 303.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 302.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 302.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 302.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 300.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 300.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 297.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 296.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 294.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 293.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 290.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 289.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 285.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 282.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 281.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 275.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 274.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 272.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 271.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 271.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 270.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 268.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 266.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 264.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 263.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 262.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 262.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 261.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 259.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 258.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 256.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 254.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 252.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 252.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 251.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 247.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 247.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 246.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 245.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 245.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 245.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 244.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 243.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 241.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 241.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 240.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 239.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 239.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 236.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 235.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 234.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 233.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 231.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 230.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 229.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 229.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 227.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 227.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 227.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 224.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 222.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 222.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 222.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 220.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 220.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 220.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 219.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 217.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 216.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 216.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 214.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 214.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 214.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 213.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 213.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 211.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 211.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 209.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 209.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 209.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 207.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 207.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 207.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 206.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 205.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 204.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 204.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 204.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 204.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 204.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 204.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 203.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 202.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 202.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 201.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 201.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 201.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 201.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 200.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 200.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 200.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 200.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 199.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 199.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 197.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 196.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 195.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 195.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 195.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 194.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 194.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 193.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 193.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 193.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 192.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 192.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 190.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 189.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 189.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 188.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 186.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 186.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 186.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 186.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 186.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 183.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 183.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 183.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 183.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 183.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 183.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 181.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 181.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 181.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 180.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 180.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 179.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 177.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 177.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 176.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 174.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 174.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 173.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 172.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 172.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 172.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 171.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 171.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 170.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 169.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 169.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 168.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 166.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 166.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 165.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 164.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 163.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 163.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 162.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 161.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 161.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 161.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 160.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 159.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 159.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 159.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 159.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 158.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 158.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 158.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 157.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 157.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 157.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 157.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 155.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 155.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 155.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 154.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 153.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 151.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 151.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 150.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 150.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 150.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 149.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 149.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 149.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 148.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 146.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 146.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 146.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 145.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 145.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 144.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 144.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 144.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 143.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 143.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 142.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 142.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 141.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 140.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 137.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 137.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 136.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 135.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 135.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 135.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 134.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 132.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 132.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 131.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 131.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 131.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 129.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 128.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 127.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 126.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 121.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 120.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 120.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 117.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 116.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 115.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 111.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 108.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 107.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 105.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 104.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 96.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 95.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 91.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 85.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 83.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 81.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 77.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 72.6
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 45.8
Samples: 4

Max nTPM: 54.3
Min nTPM: 40.3
Sample A Male 44.5
Sample B Male 54.3
Sample C Female 40.3
Sample D Female 44.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.7
771 Antisense, RP_Baylor_103306, Mouse strain C57BL/6J (56 days, male) 16.5
770 Antisense, RP_Baylor_103306, Mouse strain C57BL/6J (56 days, male) 5.2
70784952 Antisense, RP_050706_01_E08, Mouse strain C57BL/6J (56 days, male) 2.9

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