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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1103.6
nTPM
HPA Brain:
41.2
nTPM
GTEx:
1103.6
nTPM
FANTOM5:
50.1
Scaled Tags Per Million
Pig:
63.8
nTPM
Mouse:
307.3
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
41.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 32.2
2666
Male, age 74, left hemisphere
43.9
2019
Male, age 18, unknown
41.2
2828
Female, age 72, unknown
36.1
1827
Male, age 72, unknown
35.8
1833
Male, age 53, unknown
35.2
1870
Female, age 42, unknown
35.0
1830
Male, age 51, unknown
26.3
2219
Male, age 76, both hemispheres
26.1
2411
Female, age 72, unknown
21.7
2586
Male, age 75, left hemisphere
20.3
Dorsal raphe nucleus nTPM: 32.4
2298
Female, age 72, unknown
41.3
2016
Female, age 72, unknown
34.9
1828
Male, age 53, unknown
30.2
2047
Male, age 72, unknown
28.4
2750
Male, age 76, both hemispheres
27.1
Inferior colliculus nTPM: 32.9
2097
Female, age 72, unknown
41.6
1890
Male, age 53, unknown
38.6
2849
Male, age 72, unknown
25.8
1848
Female, age 42, unknown
25.6
Median raphe nucleus nTPM: 25.6
2220
Male, age 76, midline
25.6
Periaquaductal grey, anterior nTPM: 25.8
1947
Male, age 18, unknown
28.2
1795
Male, age 51, unknown
27.7
2502
Female, age 75, unknown
21.6
Periaquaductal grey, dorsal nTPM: 31.3
1831
Male, age 72, unknown
39.5
2464
Female, age 72, unknown
32.1
1840
Male, age 53, unknown
29.7
2850
Male, age 76, both hemispheres
24.1
Periaquaductal grey, lateral nTPM: 25.9
2140
Male, age 76, both hemispheres
38.5
2053
Male, age 18, unknown
24.2
2272
Male, age 74, both hemispheres
15.0
Pretectal area nTPM: 31.6
2316
Male, age 76, right hemisphere
42.3
2407
Male, age 75, both hemispheres
38.3
1815
Male, age 53, unknown
37.5
1817
Female, age 42, unknown
33.7
1944
Female, age 72, unknown
33.2
1816
Male, age 51, unknown
31.8
2825
Male, age 18, unknown
31.4
2224
Female, age 72, unknown
28.7
2007
Male, age 72, unknown
24.8
2667
Female, age 75, unknown
24.0
2273
Male, age 74, both hemispheres
21.5
Red nucleus nTPM: 36.2
2823
Male, age 76, right hemisphere
51.5
2725
Female, age 75, unknown
49.6
1865
Male, age 51, unknown
42.4
2584
Male, age 75, left hemisphere
38.9
1954
Female, age 42, unknown
34.5
2227
Male, age 72, unknown
33.6
1821
Female, age 72, unknown
33.5
1904
Male, age 53, unknown
33.5
2503
Female, age 72, unknown
30.4
2588
Male, age 74, left hemisphere
29.7
2769
Male, age 72, unknown
29.5
2785
Male, age 18, unknown
27.8
Substantia nigra nTPM: 41.2
2241
Male, age 72, unknown
67.3
2583
Male, age 75, right hemisphere
47.3
2665
Male, age 74, both hemispheres
45.7
2590
Female, age 75, unknown
40.2
1916
Female, age 42, unknown
40.0
2409
Female, age 72, unknown
37.1
2699
Male, age 18, unknown
35.9
1851
Male, age 51, unknown
34.6
1889
Female, age 72, unknown
34.3
1941
Male, age 53, unknown
29.7
Superior colliculus nTPM: 33.4
2587
Male, age 74, left hemisphere
46.7
2664
Male, age 75, both hemispheres
40.3
2668
Female, age 75, unknown
36.0
1913
Female, age 42, unknown
34.8
2261
Male, age 18, unknown
32.1
1796
Male, age 53, unknown
32.0
1995
Male, age 72, unknown
29.7
1839
Male, age 51, unknown
29.2
1895
Male, age 76, right hemisphere
29.0
2087
Female, age 72, unknown
24.2
Ventral tegmental area nTPM: 32.3
1915
Female, age 42, unknown
45.6
1942
Male, age 51, unknown
36.8
2021
Male, age 53, unknown
31.3
2218
Male, age 76, both hemispheres
30.5
2223
Female, age 72, unknown
27.2
2410
Female, age 72, unknown
22.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1103.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 1103.6
Samples: 139
Max nTPM: 4202.7
Min nTPM: 339.6
Std nTPM: 476.5
Median nTPM: 1025.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
4202.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
2688.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
2399.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
2318.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
2164.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
1863.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
1862.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
1847.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1781.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
1752.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
1748.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
1654.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1626.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
1620.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1612.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1586.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
1561.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
1537.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
1528.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1527.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
1509.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
1436.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1433.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
1411.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
1367.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
1358.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1357.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
1355.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
1354.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
1346.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
1335.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
1322.6
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
1308.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
1306.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
1291.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
1290.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1274.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
1267.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1263.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
1263.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
1256.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
1243.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
1236.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
1215.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
1191.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
1189.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
1185.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1182.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
1170.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
1170.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1151.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
1149.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
1143.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
1136.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1132.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
1132.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1131.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
1122.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
1120.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
1111.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
1090.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
1089.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
1086.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
1084.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
1075.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
1056.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
1055.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
1047.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
1045.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
1025.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
1009.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
985.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
981.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
977.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
966.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
959.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
930.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
929.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
923.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
919.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
907.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
904.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
901.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
898.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
888.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
884.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
876.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
875.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
875.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
869.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
867.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
865.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
865.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
862.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
859.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
858.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
853.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
851.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
846.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
838.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
833.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
833.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
821.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
816.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
813.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
805.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
797.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
784.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
775.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
774.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
766.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
762.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
761.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
757.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
742.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
726.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
710.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
710.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
701.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
697.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
674.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
673.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
657.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
644.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
644.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
644.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
643.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
642.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
624.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
623.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
622.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
588.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
583.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
575.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
562.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
532.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
523.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
414.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
339.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.