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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
593.6
nTPM
FANTOM5:
361.8
Scaled Tags Per Million
Pig:
376.1
nTPM
Allen mouse:
12.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
593.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 185.0
1984
Male, age 76, both hemispheres
257.0
2301
Female, age 85, both hemispheres
184.3
2188
Female, age 91, both hemispheres
165.4
2090
Male, age 80, both hemispheres
133.3
Dorsal cochlear nucleus nTPM: 184.3
2058
Male, age 76, both hemispheres
244.3
2187
Female, age 91, both hemispheres
216.7
2370
Male, age 61, both hemispheres
192.9
2802
Male, age 74, right hemisphere
154.2
2378
Male, age 80, both hemispheres
113.5
Dorsal tegmental nucleus nTPM: 236.0
2358
Male, age 61, both hemispheres
323.7
2083
Male, age 80, both hemispheres
271.6
1936
Male, age 76, left hemisphere
202.9
2326
Male, age 74, both hemispheres
145.7
Dorsolateral tegmental area nTPM: 212.0
2141
Male, age 76, both hemispheres
240.0
2654
Male, age 80, both hemispheres
231.0
2751
Female, age 85, both hemispheres
220.9
2360
Male, age 74, both hemispheres
205.4
2337
Male, age 61, both hemispheres
162.9
Kolliker-Fuse nucleus nTPM: 321.9
2163
Male, age 80, both hemispheres
578.7
2793
Female, age 91, left hemisphere
196.7
2315
Male, age 76, right hemisphere
190.3
Lateral lemniscal nuclei nTPM: 316.4
2453
Male, age 74, right hemisphere
451.4
2169
Male, age 76, both hemispheres
359.8
2036
Male, age 80, both hemispheres
307.5
2746
Female, age 85, left hemisphere
241.1
2320
Female, age 91, left hemisphere
222.1
Lateral parabrachial nucleus nTPM: 220.0
2139
Female, age 85, right hemisphere
326.1
2790
Male, age 61, both hemispheres
258.5
2013
Male, age 80, both hemispheres
198.9
2792
Male, age 76, both hemispheres
96.5
Lateral vestibular nucleus nTPM: 298.9
2184
Male, age 76, both hemispheres
436.7
2311
Male, age 80, both hemispheres
161.0
Locus coeruleus nTPM: 593.6
2123
Female, age 91, both hemispheres
998.5
2720
Male, age 74, both hemispheres
961.1
2014
Male, age 55, unknown
538.7
2317
Female, age 72, unknown
466.6
1980
Male, age 76, both hemispheres
451.7
2162
Male, age 80, both hemispheres
420.7
2788
Male, age 74, unknown
317.8
Medial parabrachial nucleus nTPM: 251.1
2156
Male, age 61, both hemispheres
399.3
2170
Female, age 91, both hemispheres
258.0
2854
Male, age 80, both hemispheres
219.9
2463
Female, age 85, right hemisphere
197.4
2786
Male, age 76, both hemispheres
181.0
Medial periolivary nuclei nTPM: 296.5
2063
Male, age 76, both hemispheres
443.5
2171
Female, age 85, both hemispheres
394.4
2791
Male, age 74, right hemisphere
300.9
2458
Female, age 91, both hemispheres
175.3
2081
Male, age 80, both hemispheres
168.2
Motor facial nucleus nTPM: 312.2
2062
Male, age 76, both hemispheres
495.4
2365
Male, age 74, right hemisphere
400.0
2327
Male, age 80, both hemispheres
321.4
2126
Male, age 61, both hemispheres
255.1
2697
Female, age 85, both hemispheres
203.1
2795
Female, age 91, both hemispheres
198.0
Motor trigeminal nucleus nTPM: 235.9
2079
Male, age 80, both hemispheres
308.4
2560
Male, age 74, both hemispheres
262.4
2335
Male, age 61, both hemispheres
244.7
2321
Female, age 91, both hemispheres
188.0
2309
Male, age 76, both hemispheres
176.1
Nuclei of the trapezoid body nTPM: 383.9
2159
Male, age 61, both hemispheres
586.0
1983
Male, age 76, both hemispheres
437.5
2735
Female, age 85, both hemispheres
422.5
2166
Male, age 80, both hemispheres
272.0
2368
Female, age 91, both hemispheres
201.5
Nucleus raphe magnus nTPM: 392.2
2455
Male, age 74, both hemispheres
624.5
2172
Female, age 85, both hemispheres
452.5
2160
Male, age 61, both hemispheres
445.1
2328
Male, age 80, both hemispheres
307.9
2051
Male, age 76, both hemispheres
294.3
2459
Female, age 91, both hemispheres
228.8
Paramedian reticular nucleus nTPM: 354.1
2313
Male, age 61, both hemispheres
478.9
2057
Male, age 80, both hemispheres
429.9
2050
Female, age 85, both hemispheres
365.7
2052
Male, age 76, both hemispheres
141.8
Pedunculopontine tegmental nucleus nTPM: 263.9
2334
Male, age 80, both hemispheres
305.9
1921
Female, age 85, both hemispheres
257.9
2338
Male, age 61, both hemispheres
228.1
Pontine nuclei nTPM: 337.1
1863
Male, age 55, unknown
445.9
2787
Female, age 85, both hemispheres
442.5
2109
Female, age 72, unknown
418.5
1968
Male, age 76, left hemisphere
376.4
2727
Male, age 61, right hemisphere
326.3
2454
Male, age 74, left hemisphere
306.4
2115
Male, age 80, left hemisphere
212.0
2319
Female, age 91, both hemispheres
168.8
Pontine raphe nucleus nTPM: 329.2
2122
Female, age 85, midline
408.8
2853
Male, age 76, midline
249.6
Posteroventral cochlear nucleus nTPM: 174.2
2752
Female, age 85, both hemispheres
332.8
2070
Male, age 76, both hemispheres
247.8
2371
Male, age 61, both hemispheres
179.0
2341
Male, age 80, both hemispheres
89.0
2135
Female, age 91, both hemispheres
22.5
Principal sensory trigeminal nucleus nTPM: 330.4
2158
Male, age 61, both hemispheres
464.3
2324
Male, age 76, both hemispheres
367.9
2008
Male, age 80, left hemisphere
325.0
2367
Female, age 91, left hemisphere
164.5
Reticular pontine nucleus, caudal nTPM: 240.3
2332
Male, age 80, right hemisphere
350.4
2092
Male, age 76, both hemispheres
307.7
2457
Female, age 91, both hemispheres
177.2
2559
Male, age 74, both hemispheres
126.0
Reticular pontine nucleus, oral nTPM: 261.6
2361
Male, age 74, both hemispheres
396.0
2012
Female, age 85, both hemispheres
309.0
1939
Male, age 80, both hemispheres
266.0
2167
Male, age 76, both hemispheres
192.2
2366
Female, age 91, both hemispheres
144.6
Reticulotegmental nucleus nTPM: 280.7
2325
Male, age 76, both hemispheres
328.6
2452
Male, age 74, both hemispheres
290.4
2333
Male, age 80, both hemispheres
256.2
2322
Female, age 91, both hemispheres
247.5
Spinal trigeminal nucleus, oral nTPM: 342.9
2164
Male, age 80, both hemispheres
443.0
2737
Female, age 85, both hemispheres
420.4
1978
Male, age 76, both hemispheres
165.1
Subcoeruleus area nTPM: 256.4
2323
Female, age 91, left hemisphere
383.8
2089
Male, age 76, left hemisphere
285.6
1958
Male, age 80, both hemispheres
255.6
2451
Male, age 74, both hemispheres
209.0
2369
Female, age 85, left hemisphere
147.9
Superior olive nTPM: 276.6
2364
Male, age 74, right hemisphere
336.8
1875
Female, age 85, both hemispheres
311.7
2329
Male, age 80, right hemisphere
271.5
2020
Male, age 76, both hemispheres
255.1
2561
Female, age 91, both hemispheres
207.7
Ventral periolivary nuclei nTPM: 313.7
2130
Female, age 85, both hemispheres
412.8
2165
Male, age 80, both hemispheres
377.1
2794
Female, age 91, left hemisphere
242.5
2023
Male, age 76, both hemispheres
222.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 288.0
2449
Male, age 74, both hemispheres
480.9
2359
Male, age 61, both hemispheres
294.4
1959
Male, age 76, both hemispheres
293.0
2840
Female, age 85, both hemispheres
258.9
2161
Male, age 80, both hemispheres
245.5
2456
Female, age 91, both hemispheres
155.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
376.1
Pig sample
Sample description
nTPM
Pons nTPM: 376.2
Samples: 4
Max nTPM: 453.2
Min nTPM: 332.1
Sample A
Female
453.2
Sample B
Female
332.1
Sample C
Male
358.2
Sample D
Male
361.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.